| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0716 |
|---|
| Symbol | |
|---|
| ID | 4579525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 698821 |
|---|
| End bp | 699639 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639768034 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_914524 |
|---|
| Protein GI | 119383468 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTCC AGACCAGCCT CAAGGCCGCC CTGTTCGGGC TTTCCGCGCT TGCGCTCGGT
TCGGCGGCTT CGGCCGACCA ACTCGACGAC ATCAAGGCCG CCGGCAAGAT CGTCACCGCG
ACCGACATGC ACTATGCCCC CTTCGACATG CTGAACAACG GCACCTATGA GGGCATGACC
AAGGATCTGT TCGACGAGGT GTCGAAAGAG ATCGGCGTCG AGCCGGTCTA TCAGGACATT
CCTTGGACCG CCGAACTGCC GGGCCTCGAG GTCGGCAAGT TCGACATCGT GATCGCCCCG
GTGACGATCA CCCCCGAACG GCTGGAGCGC TATACCTTCA CCCTGCCGAT CGCCGATGCC
ACCGTCTCGC TGGTCCGCGC GGCCGCGAAT ACCGAGCTGA CGAAGCCCGA GGACATCAAG
GGCAAGACCG TCGGCGTCCA GCAGGGCACC GCGCAGTTCC GCCAGCTTCA AGCCTATGGC
GAAAGCCTGG GCGGCGTGAA CGTCAAGGAA TACGGCACCA CGGACGAAGC CTATGCCGAC
CTGGCCGCCG GCCGGCTGGA CGCGGTGGCG GGCTCGCTGC CGAACCTGAC CTATCTGGTC
AAGAACCGCG CTGAGACCTT CGCGCTGTTC GAGCCGGCCC AGTTCGGCCA GCCGACCTAT
TTTGCCTGGG TGCTGCGCAA GGAAGAAGGC AGCGAAAGCT TTGCCAAGGC CATCAACGAC
GCGCTGCTGA AGATGACCGA CGACGGCCGC GTCAAGGCGA TCCAGGAGAA ATGGCTGGGC
AGCCATACCG AACTGCCCCG CGAAGTCCCG GCCAACTAA
|
|---|
| Protein sequence | MTFQTSLKAA LFGLSALALG SAASADQLDD IKAAGKIVTA TDMHYAPFDM LNNGTYEGMT
KDLFDEVSKE IGVEPVYQDI PWTAELPGLE VGKFDIVIAP VTITPERLER YTFTLPIADA
TVSLVRAAAN TELTKPEDIK GKTVGVQQGT AQFRQLQAYG ESLGGVNVKE YGTTDEAYAD
LAAGRLDAVA GSLPNLTYLV KNRAETFALF EPAQFGQPTY FAWVLRKEEG SESFAKAIND
ALLKMTDDGR VKAIQEKWLG SHTELPREVP AN
|
|---|
| |