Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0715 |
Symbol | |
ID | 4579524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 697092 |
End bp | 698756 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639768033 |
Product | urocanate hydratase |
Protein accession | YP_914523 |
Protein GI | 119383467 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2987] Urocanate hydratase |
TIGRFAM ID | [TIGR01228] urocanate hydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAATC CCCGTCACAA CACCCGCGAC ATTTTCCCGC CGACCGGCAC CGAGATCACC GCGAAAAGCT GGCTGACCGA GGCGCCGATG CGGATGCTGA TGAACAACCT GCATCCCGAC GTGGCCGAGA ACCCGCATGA GCTGGTGGTC TATGGCGGCA TCGGCCGTGC CGCCCGCACC TGGAAGGATT TCGACCTGAT CGTCGACGCG CTGCGCAAGC TGGAGACCGA CGAGACCCTG CTGGTGCAAT CCGGCAAGCC GGTCGGCGTG TTCAAGACCC ACAAGGATGC CCCGCGGGTG CTGATCGCCA ACTCGAACCT GGTGCCGCAT TGGGCGAACT GGGACCATTT CAACGAACTG GATAAGAAGG GCCTGGCCAT GTATGGCCAG ATGACCGCCG GCTCGTGGAT CTATATCGGG TCGCAGGGCA TCGTTCAGGG CACCTACGAG ACCTTCGTCG AGGCCGGGCG CCAGCATTAC GGCGGTGACT TGAAAGGCAA GTGGATCCTG ACCGGCGGGC TTGGCGGCAT GGGCGGCGCG CAACCGCTGG CAGCCGTCAT GGCCGGCGCC TGCTGCCTTG CCGTCGAATG CGACGAGACG CGCGCCGATT TCCGCCTGCG CACCCGCTAT GTCGACGAAA AGACCCACAG CCTCGACGAG GCGCTGGAGA TGATCGACCG CTGGACCAAG GCCGGCGAGG CGAAATCGGT GGCGCTGATC GGCAATGCCG CCGACGTGTT CCCGGAACTG GTCAAGCGCG GCGTGCGTCC CGACATCGTG ACCGACCAGA CCTCGGCCCA CGACCCGGTG CATGGCTATC TGCCGCAGGG CTGGACCGTC GCCGAATGGC GCGCGCGCCA GGAAACCGAC CCCAAGGCCG TCGAACGCGC CGCCCGCGCA TCCATGCGCA AGCAGGTCGA GGCGATGGTG GCCTTCAGCG ACCAGGGCAT CCCGACCGTC GATTACGGCA ACAACATCCG CCAGATGGCG CTGGAAGAGG GTTTCGAGCG CGCCTTCGCC TTCCCGGGCT TCGTGCCGGC GTATATCCGG CCGCTGTTCT GCAAGGGCAT CGGTCCGTTC CGCTGGGCGG CGCTGTCGGG CGACCCCGAA GACATCTACA AGACCGACCA GAAGGTGAAA GAGCTGGTGG ACGACCCGCA TCTGCACAAC TGGCTGGACA TGGCGCGCGA GCGTATCAGC TTCCAGGGCC TGCCGGCGCG GATCTGCTGG GTCGGCCTTG GCATCCGCCA CAAGCTGGGC CTCGCCTTCA ACGAGATGGT GCGCAATGGC GAGCTGAAGG CGCCCATCGT CATCGGCCGC GACCATCTCG ACTCGGGCTC GGTCGCCTCG CCCAACCGCG AGACCGAGGC GATGCAGGAC GGCTCGGACG CGGTTTCCGA CTGGCCGCTG CTGAATGCGC TGCTCAATAC CGCCTCGGGC GCGACCTGGG TGTCGCTGCA CCATGGCGGC GGCGTCGGCA TGGGCTTTTC GCAGCATTCC GGCATGGTGA TCTGCTGCGA CGGGTCCGAA GATGCCGATG CGCGGCTGGC GCGCGTGTTG TGGAACGACC CCGCCACCGG CGTCATGCGG CACGCGGACG CGGGCTATCA GATCGCACTG GACTGCGCGC GGGAGCACGG GTTGAATCTG TCCGCCATTC TCTGA
|
Protein sequence | MDNPRHNTRD IFPPTGTEIT AKSWLTEAPM RMLMNNLHPD VAENPHELVV YGGIGRAART WKDFDLIVDA LRKLETDETL LVQSGKPVGV FKTHKDAPRV LIANSNLVPH WANWDHFNEL DKKGLAMYGQ MTAGSWIYIG SQGIVQGTYE TFVEAGRQHY GGDLKGKWIL TGGLGGMGGA QPLAAVMAGA CCLAVECDET RADFRLRTRY VDEKTHSLDE ALEMIDRWTK AGEAKSVALI GNAADVFPEL VKRGVRPDIV TDQTSAHDPV HGYLPQGWTV AEWRARQETD PKAVERAARA SMRKQVEAMV AFSDQGIPTV DYGNNIRQMA LEEGFERAFA FPGFVPAYIR PLFCKGIGPF RWAALSGDPE DIYKTDQKVK ELVDDPHLHN WLDMARERIS FQGLPARICW VGLGIRHKLG LAFNEMVRNG ELKAPIVIGR DHLDSGSVAS PNRETEAMQD GSDAVSDWPL LNALLNTASG ATWVSLHHGG GVGMGFSQHS GMVICCDGSE DADARLARVL WNDPATGVMR HADAGYQIAL DCAREHGLNL SAIL
|
| |