| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0695 |
|---|
| Symbol | ruvA |
|---|
| ID | 4580636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 676578 |
|---|
| End bp | 677249 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639768013 |
|---|
| Product | Holliday junction DNA helicase RuvA |
|---|
| Protein accession | YP_914503 |
|---|
| Protein GI | 119383447 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.127346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.851486 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGAC GCATCGCCGG AGTGATCCTG CATCGCGCGC AGGACCATGT GCTGATCGAC
GTGCGCGGCG TGGGCTACAT CGTCCATGTC AGCGAACGCA CCGCCGCCAA CCTGCCCCCT
GCCGGGCAGG CGACCGCGCT TTACACCGAA TTGCTGGTGC GCGAGGACCT GTTGCAGCTG
TTCGGCTTTC CCACGCTTCT GGAAAAGGAA TGGCACCGGC TGCTGACCTC GGTGCAGGGC
GTCGGCGCCA AGGTGGCGCT GGCGATCCTG GGCACGCTGG GACCGGACGG GCTGTCGCGC
GCGCTGGCGC TTGGCGACTG GTCGGCGCTG AGGAAAGCCC CCGGCGTCGG CCCGAAACTG
GCGCAGCGCG TGGTGATGGA GCTCAAGGAC AAGGCGCCGG CCGTCATGGC GCTTGGCGGG
GCGCTGACCG TCGATCCCGG CCCGCTGCCC GAGGTCGAGC TGGTCGAGGC CGCCGTCCCC
GCGCCAGTCC CGGCCAAAGC GGCGCCCTCT TCGGCGCAGG CGACGGCGGA TGCGCTCTCG
GCCCTGGGGA ATCTGGGTTA TGCTCCGTCC GAGGCCGCAT CGGCGGTGGC CGAGGCCGCG
GCACGGGAAC CCGCCGCGCC GACCGCGGCG TTGATCCGCG CAGCCCTGCG GCTGCTGGCG
CCCAAGGAGT AA
|
|---|
| Protein sequence | MIGRIAGVIL HRAQDHVLID VRGVGYIVHV SERTAANLPP AGQATALYTE LLVREDLLQL
FGFPTLLEKE WHRLLTSVQG VGAKVALAIL GTLGPDGLSR ALALGDWSAL RKAPGVGPKL
AQRVVMELKD KAPAVMALGG ALTVDPGPLP EVELVEAAVP APVPAKAAPS SAQATADALS
ALGNLGYAPS EAASAVAEAA AREPAAPTAA LIRAALRLLA PKE
|
|---|
| |