| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0674 |
|---|
| Symbol | |
|---|
| ID | 4578744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 656409 |
|---|
| End bp | 657740 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639767992 |
|---|
| Product | xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_914482 |
|---|
| Protein GI | 119383426 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.163748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.211367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGC AAAGAACCCC AACCGATCCG GTCGATGAGG TCCTGCCGCT CAAGGACCTG
ATTCTCTATG GCTTTCAGCA TGTGCTGGTG ATGGCCGCAT CGCCGATCAC GGCGGTATTC
CTGGTCGCGC AGACGCTGGG CTTCGATTCG GCGCTGACCG TCTCGATCAT CAGCGCGACG
TTTCTTGTCT GCGGCATCGG CTCGATCCTG CAAAGCTTCG GGACGGCCGG TTTCGGCGCG
CGCCTGCCCT TCATCATGGT GCCCGGCGGG GCCCCCATCG CGATCTTTCT GGCCATCGCC
AACCAGACCG ACGTGCAGAC CGCCGTCGGT GCGGTGCTGA TGACGGGGGC GTTCTATTTC
CTGGCCTTGC CGGTCTTTCG CCGGCTGCTG CGCTTTTTCC CGCCCATCGT GGTCGGCACC
ATGCTGCTGC TGGTGGCGGT GAACCTGGTC AAGATCTATG GCGGCACGAT CACCGGCCGC
TCGGGCAGCG CGGATTTTGC CGATCCGGTC AATGTCGGGC TGGCGCTGGC GACCATCGCC
CTGACGGTGA TCTTCTCGCG CATCTTCACC GGCACCCTGC AGCGCATCTC GGTGATGCTG
GGGCTGATCG CGGGCACGCT GCTGGCCGCG GCCCTGGGCC GGTTGGACAT GACGGGCGTG
ATGCAGGGCT CGTTCATCGC GGTGCCGCAG CCGTTTCCGT TCGGGATGCC GAAATTCGAC
GTCATCGCCG CGCTGCCGCT GATCATCTTT TCCATCATCT CGATGGCCGA GGCGACCGGC
CAGACCATCG CCACCGCCGA GATCGTGGAC CGCAAGGGCG ACGCCCATGC CATCGTGCCG
CGCACCATCC GGGGCGATGC GGCGATGTCG CTCCTGGGGG GCATGTTCGG CACCTCGCTG
ATCATCACCT CGGGCGAGAA CGTGGGCATC GTCCGCGCGA CGGGCGTGCG CTCGCGCTAT
GTCACGGCCA TGGCGGGGGT GATCCTCGTC CTGATCGCGC TGATCGCGCC GATCTCGCGG
CTGGCAAGCG TGCTGCCCGG GCCGGTCGTC GGCGGCACGG CGGTCATCGT CTTCTCGATC
ATCGGGGTGA TCGGCATCCA TGTCCTCAGC CGCGTCGATC TGCGCGAGCA CGGGGCGATG
TTCACCCTGG CCTCGGGGCT GGCGATGGGG CTGATGCCGA TCCTGGTGCC CGGCATCTAC
AGCCAGTTCC CGCAATGGTC GCAGATGATC CTGGGCAACG GGCTGGCCAT GGGCACGATC
ACGGCGGCGG TGGTCAACGC GCTCTTCCAG TTCAAGGCGC CGAACTCTCT CGACCACAAG
GAGCATGCCT GA
|
|---|
| Protein sequence | MTSQRTPTDP VDEVLPLKDL ILYGFQHVLV MAASPITAVF LVAQTLGFDS ALTVSIISAT
FLVCGIGSIL QSFGTAGFGA RLPFIMVPGG APIAIFLAIA NQTDVQTAVG AVLMTGAFYF
LALPVFRRLL RFFPPIVVGT MLLLVAVNLV KIYGGTITGR SGSADFADPV NVGLALATIA
LTVIFSRIFT GTLQRISVML GLIAGTLLAA ALGRLDMTGV MQGSFIAVPQ PFPFGMPKFD
VIAALPLIIF SIISMAEATG QTIATAEIVD RKGDAHAIVP RTIRGDAAMS LLGGMFGTSL
IITSGENVGI VRATGVRSRY VTAMAGVILV LIALIAPISR LASVLPGPVV GGTAVIVFSI
IGVIGIHVLS RVDLREHGAM FTLASGLAMG LMPILVPGIY SQFPQWSQMI LGNGLAMGTI
TAAVVNALFQ FKAPNSLDHK EHA
|
|---|
| |