Gene Pden_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0673 
Symbol 
ID4578743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp655286 
End bp656311 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content69% 
IMG OID639767991 
Productregulatory protein, LacI 
Protein accessionYP_914481 
Protein GI119383425 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.371597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.192843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGACT GCCCACAAAC GGGGAATGAG GACGGTTTGA GCAAGCCCAC CATCTCGGAT 
CTGGCCAGGG CGGCGGGGGT GTCGGTCACC ACCGTTTCGC ATGCCTTCAG CGGCCGGCGG
CGCGTGGACC CCGAAACCAG CAAGCGCATC CACGCGCTGG CGGAACAGAT GGGTTATCAT
CCCAGCAGCA TGGCGCGCGC CCTGCGCAGC GGGCGAAACG GGACCATCGC GCTGGCCTCG
TCCATGCCCT TCGCCGTCGC GGCCGGACCG TCGCGGCTGG GCTTTCTGAT GGAGATCGCG
GCCTCTGCGG CCATCTCGGC CCTGACCCGC GACCTGGCGC TGTGCCTGAT CCCCCCGCAT
CCCGCCGGGA AAGGCTATGC TTCGGTCGGG TTCGACGGCG TGATCCTGGT CGAGCCGATG
CGCGACGACC CGCTGGTCGC CCATTTCGAG CAGCGCAAGA CCCCCATCGT CTCGGTCGGA
ACGGTGCCCG GCCGGCCCGA CATTCCCGCC GTGGACATGC GCTCGGGCGA GACGGCCGCG
ATGCTGCTGG ACCACCTGGC CCGGCAGGGG TGCCGCCACA TCGCCGCGCT GATCGGCTCG
GCCCCGCGGA CCAGCCAGAT CGAGGCCGAG GCAGCCTTTC GCACCCTGGC CGCGTCCCCG
GACAGGCTGC TGAAGCTGAG CGAGGAGGAA GGCGAGGAGA TCGGCTATCG CGAGACGCTG
CGGCTGTTGC GCGACGATCC CTCGATCGAC GGGATATTCG CCGCCGTCGA CGCCTTTGCC
AGCGGCGCGG TTCGGGCGGC GCATGAACTG GGACGGGTGA TTCCCGATCA ATTGCGCATC
GTGACCCGCT ATGACGGGCT CAGGGCCAAG CTGTCCCAGC CCCCGCTGAC GGCTGTCGAC
CTGCACCTGC CGGCAGTCGC CGAGGCGGCG GTCCATCTGC TGTTTGACCG CATCGAGGGC
ACCAGCAGGA CGGTCGCGGC GGAACTGCCG GAGCTGGTCG TCCGGCAATC TACGGCCGTC
TGCTAG
 
Protein sequence
MLDCPQTGNE DGLSKPTISD LARAAGVSVT TVSHAFSGRR RVDPETSKRI HALAEQMGYH 
PSSMARALRS GRNGTIALAS SMPFAVAAGP SRLGFLMEIA ASAAISALTR DLALCLIPPH
PAGKGYASVG FDGVILVEPM RDDPLVAHFE QRKTPIVSVG TVPGRPDIPA VDMRSGETAA
MLLDHLARQG CRHIAALIGS APRTSQIEAE AAFRTLAASP DRLLKLSEEE GEEIGYRETL
RLLRDDPSID GIFAAVDAFA SGAVRAAHEL GRVIPDQLRI VTRYDGLRAK LSQPPLTAVD
LHLPAVAEAA VHLLFDRIEG TSRTVAAELP ELVVRQSTAV C