Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0673 |
Symbol | |
ID | 4578743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 655286 |
End bp | 656311 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639767991 |
Product | regulatory protein, LacI |
Protein accession | YP_914481 |
Protein GI | 119383425 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.371597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.192843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAGACT GCCCACAAAC GGGGAATGAG GACGGTTTGA GCAAGCCCAC CATCTCGGAT CTGGCCAGGG CGGCGGGGGT GTCGGTCACC ACCGTTTCGC ATGCCTTCAG CGGCCGGCGG CGCGTGGACC CCGAAACCAG CAAGCGCATC CACGCGCTGG CGGAACAGAT GGGTTATCAT CCCAGCAGCA TGGCGCGCGC CCTGCGCAGC GGGCGAAACG GGACCATCGC GCTGGCCTCG TCCATGCCCT TCGCCGTCGC GGCCGGACCG TCGCGGCTGG GCTTTCTGAT GGAGATCGCG GCCTCTGCGG CCATCTCGGC CCTGACCCGC GACCTGGCGC TGTGCCTGAT CCCCCCGCAT CCCGCCGGGA AAGGCTATGC TTCGGTCGGG TTCGACGGCG TGATCCTGGT CGAGCCGATG CGCGACGACC CGCTGGTCGC CCATTTCGAG CAGCGCAAGA CCCCCATCGT CTCGGTCGGA ACGGTGCCCG GCCGGCCCGA CATTCCCGCC GTGGACATGC GCTCGGGCGA GACGGCCGCG ATGCTGCTGG ACCACCTGGC CCGGCAGGGG TGCCGCCACA TCGCCGCGCT GATCGGCTCG GCCCCGCGGA CCAGCCAGAT CGAGGCCGAG GCAGCCTTTC GCACCCTGGC CGCGTCCCCG GACAGGCTGC TGAAGCTGAG CGAGGAGGAA GGCGAGGAGA TCGGCTATCG CGAGACGCTG CGGCTGTTGC GCGACGATCC CTCGATCGAC GGGATATTCG CCGCCGTCGA CGCCTTTGCC AGCGGCGCGG TTCGGGCGGC GCATGAACTG GGACGGGTGA TTCCCGATCA ATTGCGCATC GTGACCCGCT ATGACGGGCT CAGGGCCAAG CTGTCCCAGC CCCCGCTGAC GGCTGTCGAC CTGCACCTGC CGGCAGTCGC CGAGGCGGCG GTCCATCTGC TGTTTGACCG CATCGAGGGC ACCAGCAGGA CGGTCGCGGC GGAACTGCCG GAGCTGGTCG TCCGGCAATC TACGGCCGTC TGCTAG
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Protein sequence | MLDCPQTGNE DGLSKPTISD LARAAGVSVT TVSHAFSGRR RVDPETSKRI HALAEQMGYH PSSMARALRS GRNGTIALAS SMPFAVAAGP SRLGFLMEIA ASAAISALTR DLALCLIPPH PAGKGYASVG FDGVILVEPM RDDPLVAHFE QRKTPIVSVG TVPGRPDIPA VDMRSGETAA MLLDHLARQG CRHIAALIGS APRTSQIEAE AAFRTLAASP DRLLKLSEEE GEEIGYRETL RLLRDDPSID GIFAAVDAFA SGAVRAAHEL GRVIPDQLRI VTRYDGLRAK LSQPPLTAVD LHLPAVAEAA VHLLFDRIEG TSRTVAAELP ELVVRQSTAV C
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