Gene Pden_0672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0672 
Symbol 
ID4578742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp653890 
End bp655170 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID639767990 
Productputative adenylate-forming enzyme 
Protein accessionYP_914480 
Protein GI119383424 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID[TIGR02304] probable adenylate-forming enzyme 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.393226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.19612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA CCGCATTCCT GCACAGCCGC TATGGGCGCG GCTTCGCCTC TCGCACCGAA 
ATCGAGGCGC ATCACGCCGC CGCCTTTCGC CGGTTCCGCG CGCAGGTCAT GCCGCGCTCG
CCGTTCTATC GCGGCATGGC CGAACTGCCG CTGGAAGATC TGCCGCGCAT GGACAAGGCC
CGGTTGATGG CGAATTTCTC GGCCATCAAC ACCTGCGGCA TCGACCATGA CACGGCGATG
CGGACCGCCA TCCGCGCCGA GACCGGCCGC GATTTTCGCC CGTTGATCGG CGAGGTTTCG
GTGGGGCTGT CGACCGGCAC CTCGGGACAG CGCGGCCTGT TTCTGGCGAC GCCGCGCGAA
AGGCGGCTGT GGGCCGCGAT CATGCTGGGG CGCTATTGGC CGGAGCTGTG GCGCCGCCAG
CGCGTGGCGT TCTTCATGCG TGCCGACAAC GCGCTTTATC GCAGCCTGTC GAATGCGCTG
GTCCGCTTCG AGTTCTTCGA CCTGCTGTTG CCGTTCGAGG AACACCTTTC CGCGCTGGCC
GGGCTGAATC CCAGCGTGCT GATCGCGCCT GCACGGATTC TGGCGATGCT GGCCGAGCGG
CAGGTGGCCG GCCGGATTTC CCTGTCGCCG CGGCGGGTGA TCTCGGTGGC CGAGACGCTG
TCGCCCGACG ACGCGGCGCT GATCGGGCAA GCCTTCCGCA TCCGCGTCGA TCAGGTCTAT
CAGGCGACCG AGGGCGTTCT GGCGATGACC TGCCGGGCGG GCAACCTGCA TCTGAACGAG
CGCTGGCTGC GCATCGACCG CGACGTGATC GATCGGGCGA CGGGCGCCTT CTGCCCGGTC
ATCCACGACT TCACCCGCGA AAGCCTGCCG ATCCTGAACC ATCGCCTGGA TGACGTGCTG
ATCCCCGATC CCGACCCTTG CCCTTGCGGC TGCGCCAGCC AGCGCATCGC CCGCATCGAG
GGGCGCGAGG ACGATATCCT GTGGTGGGCC TCGGCCGCGG GGCCGCGCAT GGTCACGTCC
GAGGCGATCC GAACCGCCAT CGCCTGCCTG CCGCAGCCTT TGCGCGACTA TCGGGTGATC
CAGCGCGGCA GGGGGCTGCA TATCTGGCTG GATGATGCCG CATCGGGGGC CGATACGGCG
CTGGGGGCCA GCCTGGCGGG GCTGGCACGG CAGATGGGCT GCCAATTGCC CGAGCTTGCC
TTTCATCGCG GCCTGCCGCC GGAATCCGAC GCCAAGCGCC GCCGGATCCG GGTCGAGCCG
GACGCCATCG CCCCACGGTG A
 
Protein sequence
MSLTAFLHSR YGRGFASRTE IEAHHAAAFR RFRAQVMPRS PFYRGMAELP LEDLPRMDKA 
RLMANFSAIN TCGIDHDTAM RTAIRAETGR DFRPLIGEVS VGLSTGTSGQ RGLFLATPRE
RRLWAAIMLG RYWPELWRRQ RVAFFMRADN ALYRSLSNAL VRFEFFDLLL PFEEHLSALA
GLNPSVLIAP ARILAMLAER QVAGRISLSP RRVISVAETL SPDDAALIGQ AFRIRVDQVY
QATEGVLAMT CRAGNLHLNE RWLRIDRDVI DRATGAFCPV IHDFTRESLP ILNHRLDDVL
IPDPDPCPCG CASQRIARIE GREDDILWWA SAAGPRMVTS EAIRTAIACL PQPLRDYRVI
QRGRGLHIWL DDAASGADTA LGASLAGLAR QMGCQLPELA FHRGLPPESD AKRRRIRVEP
DAIAPR