Gene Pden_0652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0652 
Symbol 
ID4578957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp629991 
End bp631136 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID639767970 
Producthistidinol-phosphate aminotransferase 
Protein accessionYP_914460 
Protein GI119383404 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTGC GCGCGGGCCG GCTTTGCGGT TTCTGTGGCG GCATGACCCG CTTTCGCTTC 
GCCCCGATCG CCGCCGCGCT GCCCGCCACG GTTCCCTTCA CCGGCCCCGA GACGCTGGAG
CGTCGCCGCG GCGCGCCGTT CCGTGCCCGT CTGGGGGCCA ACGAGAACGG CTTCGGCCCC
TCGCCCCGTG CGGTCGAGGC CATGGAGCGG GCGGCGGCCG AGGCATGGAA ATACGCCGAT
CCCGACAGCC ATGACCTGCG CCATGCGCTG GCCGGGCATC ACGGCGTCGC GCCGCAGAAC
GTCATGGTCG GCGAGGGGAT CGACGGGCTC CTGGGCCTGC TGGTCCGGCT GATGGTCGCG
CCGGGCGAGG CGGTGGTGAC CTCGGACGGG GCCTATCCGA CCTTCAACTA TCATGTCGCG
GGCTTCGGCG GCCGGCTGGT GAAGGTGCCT TATCGCGAGG ATGCCGAGGA TCCCGATGCG
CTGGTCGCCG CGGCGTGCGA GACCGGGGCG CGGCTGGTCT ATCTGGCCAA TCCCGACAAC
CCGATGGGCA GCTGGCATTC CGGCGCGCGG ATCGAGGCCA TGCTGGACGA TCTGCCGCAG
GGCAGCCTGC TGGTGCTGGA CGAGGCCTAT GCCGAATTCG CCCCGGAAGA CGCCATCCCG
CGCATCGATC CCGAGGATGC GCGCGTCATC CGTTTCCGCA CCTTTTCCAA GGCCCATGCC
ATGGCGGGCG CGCGGATCGG CTATGCCATC GGCCCGGCCG AACTGATCGC CGGCTTTGAC
CGCATCCGCA ACCATTTCGG CATCAACCGC ATCGGCCAGG TCGGCGCGCT GGCGGCGCTC
GGGGATCGGG ACTGGCTGAC CCATATCCGG GCCGAGGTCG CTGCCGCCCG CGACCGTATC
GGCGACATCG CCCGCATGAA CGGGCTGGCC GCCTTGCCCT CGGCCACGAA TTTCGTCGCC
ATCGATTGCG GCCGCGATGG CGCCTTTGCC CAGGCCCTGC TGGACGGGTT GGCGCAACAG
GGCGTTTTCG TCCGCATGCC GGGCGCGGCC CCGATGAACC GCTGCATCCG CGTCTCTTGC
GGCCCCGCGC CGGAACTCGC CGCCTTCGCC GAGGCGCTGC CCAAGGCGAT CGGGACACTG
GCCTGA
 
Protein sequence
MPLRAGRLCG FCGGMTRFRF APIAAALPAT VPFTGPETLE RRRGAPFRAR LGANENGFGP 
SPRAVEAMER AAAEAWKYAD PDSHDLRHAL AGHHGVAPQN VMVGEGIDGL LGLLVRLMVA
PGEAVVTSDG AYPTFNYHVA GFGGRLVKVP YREDAEDPDA LVAAACETGA RLVYLANPDN
PMGSWHSGAR IEAMLDDLPQ GSLLVLDEAY AEFAPEDAIP RIDPEDARVI RFRTFSKAHA
MAGARIGYAI GPAELIAGFD RIRNHFGINR IGQVGALAAL GDRDWLTHIR AEVAAARDRI
GDIARMNGLA ALPSATNFVA IDCGRDGAFA QALLDGLAQQ GVFVRMPGAA PMNRCIRVSC
GPAPELAAFA EALPKAIGTL A