Gene Pden_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0643 
Symbol 
ID4580254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp621688 
End bp622566 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content73% 
IMG OID639767961 
Productdienelactone hydrolase 
Protein accessionYP_914451 
Protein GI119383395 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.424944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAC GGCTGATCCT TTTGCTGGCG ATGCTGGGGC TGGTGGCCCT GGCGCTGGGG 
CTGAACACGG CGCGCAACTA CGCCGGCTGG CAGCCCGCGA CCGACACCCC GGCCGAACGG
CTGGCCCGGC TGGAGCCGCA TTGGCGCCTC CTGCGGCCCG ACGGCCCCGG CCCGCACCCC
GCCGCGGTGC TGCTGTCGGG CTGCGACGGG GTGCATGACA ACATGGACTA TTGGGCCCGG
CAATTCGTGG CCATGGGCCG GGCGGCGCTG ATCCTCGACA GCCATGCGCC CCGGCTGCTG
GACAAGGCGC AGGCCTGGCG CGCGCTCTGC GCCGGCCAGG TGCTGCCGGG GGCCGAGCGT
GCCGGCGACC TGGCCGTGGC GCTGGCCGCG CTGCGCGGGA TGCCGGGCAT CGACGCCTCG
GACGTGGCTC TGCTCGGCGC CTCGCATGGC GGCTGGACGG TGATGGAACT TCTGCGCCAA
CTCGGCGAGG ACGAGCCGCC GCCGGGCCTG ACCGCATGGC CCGCCCCGCC CGACAGCCTG
GCCGCGCCGC TTGGTCCGGT CGTGCTGCTC TATCCCTATT GCGGCCTCTT GAACGGCGCG
GCCAAGGGAC CGTGGCCCGG CCATGTGCAG GGGCTGATGC TGCTGGCCGA GCTGGATTCG
ATCACCGATT CCGCCGATTG CCGCCAGATG GGCGAGGATC TGATTGCGCA GGGCGCCCGC
CTGACCGTCA CCACCTATCC CGGCATCAAC CACGGCTTCG ACCAGCGCGA GCGCTCGTCG
CTCTCGCCGC TGGAATTCGA CGCAAAGGCG CGGGCGCGGG CCACCCGCGA CATCCGCGCC
TTCATGCAGG GTTTTGCCGC GCCCGCGGCC GGGATATGA
 
Protein sequence
MRKRLILLLA MLGLVALALG LNTARNYAGW QPATDTPAER LARLEPHWRL LRPDGPGPHP 
AAVLLSGCDG VHDNMDYWAR QFVAMGRAAL ILDSHAPRLL DKAQAWRALC AGQVLPGAER
AGDLAVALAA LRGMPGIDAS DVALLGASHG GWTVMELLRQ LGEDEPPPGL TAWPAPPDSL
AAPLGPVVLL YPYCGLLNGA AKGPWPGHVQ GLMLLAELDS ITDSADCRQM GEDLIAQGAR
LTVTTYPGIN HGFDQRERSS LSPLEFDAKA RARATRDIRA FMQGFAAPAA GI