| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0605 |
|---|
| Symbol | |
|---|
| ID | 4579649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 580103 |
|---|
| End bp | 580738 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639767923 |
|---|
| Product | thiamine pyrophosphokinase |
|---|
| Protein accession | YP_914413 |
|---|
| Protein GI | 119383357 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1564] Thiamine pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.681659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTAGTG CCCGCCCGGT CACGCTGATC GGCGGTGCGC CGGTCGGCCG CGCCGATCTG
GAGCAGGCGC TGGCCCTGGC GCCGGTGGTG GCCGCCGCCG ATAGCGGCGC CGATACCGCG
CTGAGCCACG GGTTGATGCC GGCGGCGGTC TGGGGCGATT TCGACAGCAT TTCCGCCCGC
GCCCGGGCCG AGATCCCGCT GGCGAACCAG CACCCCATCG CCGAGCAGAA CAGCACCGAT
TTCGAGAAAT GCTTGTCCAA TCTCGATGCT CCCTTCGTCG TCGCCCTGGG CTTTTCGGGC
GCGCGCCATG ACCATTTCCT GTCGGTGCTC AATGTGCTCG CCCGCCGTAT CGGCCCGCCC
TGCATCCTGA TCGCGGGCGA GGACGTGATC ACGCTTGCCC CGCCGCGCCT CGCGCTGGAT
CTCGCGCCCG GCACGCGGGT CTCGCTTTTC CCGATGGGCC CGGCCACCGG CCGCTCGCAG
GGCCTGAAAT GGCCCATCGA CGGCCTGGCC TTCGCGCCGG GCGGCCGCAG CGGCACCTCG
AACCAGGCCA CGGGTCCGGT CACGCTGGAA TGCGACGGCC CGATGTTGCT GATCCTGCCG
CGCTCGGAAC TGGCGACGCT CGCCCGCGCC CTCTGA
|
|---|
| Protein sequence | MASARPVTLI GGAPVGRADL EQALALAPVV AAADSGADTA LSHGLMPAAV WGDFDSISAR
ARAEIPLANQ HPIAEQNSTD FEKCLSNLDA PFVVALGFSG ARHDHFLSVL NVLARRIGPP
CILIAGEDVI TLAPPRLALD LAPGTRVSLF PMGPATGRSQ GLKWPIDGLA FAPGGRSGTS
NQATGPVTLE CDGPMLLILP RSELATLARA L
|
|---|
| |