Gene Pden_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0579 
Symbol 
ID4579623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp550394 
End bp551167 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID639767897 
Producthypothetical protein 
Protein accessionYP_914387 
Protein GI119383331 
COG category[R] General function prediction only 
COG ID[COG2961] Protein involved in catabolism of external DNA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0365448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.281222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCCT ATCAGCACGC CTATCACGCC GGGAATCTGG CCGACCTGTA CAAGCACGCG 
CTTCTCGCGT CGATTCTGGC TTACCTGACC GCCAAGCCGA AGCCGCTGAG CTACCTGGAA
ACCCATGCCG GCCGCGGCCT TTACGACCTG TCGTCGCCCG AGGCCGACAA GACCGGCGAG
GCGGCGGCGG GCATCACCCG CGCCCTTGCC GAAAACTGGC TGCCGGCCGA TCATCCGCTG
TGCCTTGCGC TGGATGCGGT GCGCGCCCGC CATGGCGCCT CGGCCTATCC CGGATCACCG
TTGATCGCAC GGCATTTCCT GCGACCGGGC GACGTGGCGC ATCTGGCCGA ACTGCACCCG
GCCGAGCACG AGGCTTTGGC CGAGATCGCC GGCTTTGCGC ATCTGCACCG ACAGGACGGC
TTCCAGATGG CGCAGGCAAT CTGCCCGCCC ACCCCGCGCC GGGGGCTGCT GCTGATCGAC
CCCAGCTATG AGGTCAAGGC CGATTACGAC GCCATCCCCC GCCAAATCGC CAAGCTGGCG
CGCAAATGGA ACGTGGGCGT GATCGTACTG TGGTATCCGA TCCTGACCGA CCTTCGCCAT
GCGCCGATGG TCGAGGCTTT GCGCCGCAAC CACCCCGAGG CACTGGTTTC CGAAGTGCGT
TTCCCGCCGG CACGGCCCGG ACATGGCATG GTCGGCTCGG GCATGGTCGT GCTGAACCCG
CCCTATGGCC TGGCCGAGGA AGCCCTGCGA ATCGAGGCGC TCTACGACCG ATAG
 
Protein sequence
MLSYQHAYHA GNLADLYKHA LLASILAYLT AKPKPLSYLE THAGRGLYDL SSPEADKTGE 
AAAGITRALA ENWLPADHPL CLALDAVRAR HGASAYPGSP LIARHFLRPG DVAHLAELHP
AEHEALAEIA GFAHLHRQDG FQMAQAICPP TPRRGLLLID PSYEVKADYD AIPRQIAKLA
RKWNVGVIVL WYPILTDLRH APMVEALRRN HPEALVSEVR FPPARPGHGM VGSGMVVLNP
PYGLAEEALR IEALYDR