Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0579 |
Symbol | |
ID | 4579623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 550394 |
End bp | 551167 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639767897 |
Product | hypothetical protein |
Protein accession | YP_914387 |
Protein GI | 119383331 |
COG category | [R] General function prediction only |
COG ID | [COG2961] Protein involved in catabolism of external DNA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0365448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.281222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTCCT ATCAGCACGC CTATCACGCC GGGAATCTGG CCGACCTGTA CAAGCACGCG CTTCTCGCGT CGATTCTGGC TTACCTGACC GCCAAGCCGA AGCCGCTGAG CTACCTGGAA ACCCATGCCG GCCGCGGCCT TTACGACCTG TCGTCGCCCG AGGCCGACAA GACCGGCGAG GCGGCGGCGG GCATCACCCG CGCCCTTGCC GAAAACTGGC TGCCGGCCGA TCATCCGCTG TGCCTTGCGC TGGATGCGGT GCGCGCCCGC CATGGCGCCT CGGCCTATCC CGGATCACCG TTGATCGCAC GGCATTTCCT GCGACCGGGC GACGTGGCGC ATCTGGCCGA ACTGCACCCG GCCGAGCACG AGGCTTTGGC CGAGATCGCC GGCTTTGCGC ATCTGCACCG ACAGGACGGC TTCCAGATGG CGCAGGCAAT CTGCCCGCCC ACCCCGCGCC GGGGGCTGCT GCTGATCGAC CCCAGCTATG AGGTCAAGGC CGATTACGAC GCCATCCCCC GCCAAATCGC CAAGCTGGCG CGCAAATGGA ACGTGGGCGT GATCGTACTG TGGTATCCGA TCCTGACCGA CCTTCGCCAT GCGCCGATGG TCGAGGCTTT GCGCCGCAAC CACCCCGAGG CACTGGTTTC CGAAGTGCGT TTCCCGCCGG CACGGCCCGG ACATGGCATG GTCGGCTCGG GCATGGTCGT GCTGAACCCG CCCTATGGCC TGGCCGAGGA AGCCCTGCGA ATCGAGGCGC TCTACGACCG ATAG
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Protein sequence | MLSYQHAYHA GNLADLYKHA LLASILAYLT AKPKPLSYLE THAGRGLYDL SSPEADKTGE AAAGITRALA ENWLPADHPL CLALDAVRAR HGASAYPGSP LIARHFLRPG DVAHLAELHP AEHEALAEIA GFAHLHRQDG FQMAQAICPP TPRRGLLLID PSYEVKADYD AIPRQIAKLA RKWNVGVIVL WYPILTDLRH APMVEALRRN HPEALVSEVR FPPARPGHGM VGSGMVVLNP PYGLAEEALR IEALYDR
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