Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0533 |
Symbol | |
ID | 4578720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 503082 |
End bp | 503831 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639767850 |
Product | sugar transferase |
Protein accession | YP_914341 |
Protein GI | 119383285 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.323872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGATTC ACCAAGATTG GGAAAAGGCC GATATCGCAC GGTTCGCCAC ATTGCCCCAG CCCGAGATGT CGTGGTTCAA GGGCGAGGTG CATGCGACCC GTGTGGCGAC CATGCCCCTG TCGAAGCGGT TGTTCGACAT CGTCCTGGCG TTGGTCCTGC TGGTGCCGCT GTCCATCGTC ATGGCGGTCT TTGCCCTGAT CCTGCTGATC GTGCAGGGAC GGCCGATCTT TTACGCCGCG CCGCGCATGG TCGCGCCGGG GCGGACCTTC ACCCATCTCA AGTTCCGCAC CATGCTGCGG CAAGAGGGCG ATTTCGGCGT CACCGGCGCG CACAAGGCAT GGCGCATCAC GCCGCTGGGC CATTTCATGC GCCGCACGCG CATCGACGAA TTGCCGCAGC TGTTCAACAT CCTCAAGGGC GACATGAGCT TCGTCGGCCC GCGCCCGACC ATCCGCGAAT ATGTCGAACG CTATCCCACC GTCTATGGCC AGGTGCTGAA AAGCCGTCCC GGCGTCACCG GCCTTGCGAC GCTGATCTAT CATCGCCACG AGGACCGCAT CCTGCGCCGC TGCAAGAGCG CCGAGGCGAC CGAGGCCGCC TATGCCGGGC GCTGCCTGCC GACCAAGCTG AAGATCGACC TGATCTATCA GAGGAACCGG ACGCTGGCGC TGGATCTGTG GATCATCTGG CGCACCGTCC TGACGGTGCT TTACAAGGAC GAGCGGCCCC GCCGGCGCGG CCGCAAGTAG
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Protein sequence | MTIHQDWEKA DIARFATLPQ PEMSWFKGEV HATRVATMPL SKRLFDIVLA LVLLVPLSIV MAVFALILLI VQGRPIFYAA PRMVAPGRTF THLKFRTMLR QEGDFGVTGA HKAWRITPLG HFMRRTRIDE LPQLFNILKG DMSFVGPRPT IREYVERYPT VYGQVLKSRP GVTGLATLIY HRHEDRILRR CKSAEATEAA YAGRCLPTKL KIDLIYQRNR TLALDLWIIW RTVLTVLYKD ERPRRRGRK
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