Gene Pden_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0533 
Symbol 
ID4578720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp503082 
End bp503831 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID639767850 
Productsugar transferase 
Protein accessionYP_914341 
Protein GI119383285 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.323872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATTC ACCAAGATTG GGAAAAGGCC GATATCGCAC GGTTCGCCAC ATTGCCCCAG 
CCCGAGATGT CGTGGTTCAA GGGCGAGGTG CATGCGACCC GTGTGGCGAC CATGCCCCTG
TCGAAGCGGT TGTTCGACAT CGTCCTGGCG TTGGTCCTGC TGGTGCCGCT GTCCATCGTC
ATGGCGGTCT TTGCCCTGAT CCTGCTGATC GTGCAGGGAC GGCCGATCTT TTACGCCGCG
CCGCGCATGG TCGCGCCGGG GCGGACCTTC ACCCATCTCA AGTTCCGCAC CATGCTGCGG
CAAGAGGGCG ATTTCGGCGT CACCGGCGCG CACAAGGCAT GGCGCATCAC GCCGCTGGGC
CATTTCATGC GCCGCACGCG CATCGACGAA TTGCCGCAGC TGTTCAACAT CCTCAAGGGC
GACATGAGCT TCGTCGGCCC GCGCCCGACC ATCCGCGAAT ATGTCGAACG CTATCCCACC
GTCTATGGCC AGGTGCTGAA AAGCCGTCCC GGCGTCACCG GCCTTGCGAC GCTGATCTAT
CATCGCCACG AGGACCGCAT CCTGCGCCGC TGCAAGAGCG CCGAGGCGAC CGAGGCCGCC
TATGCCGGGC GCTGCCTGCC GACCAAGCTG AAGATCGACC TGATCTATCA GAGGAACCGG
ACGCTGGCGC TGGATCTGTG GATCATCTGG CGCACCGTCC TGACGGTGCT TTACAAGGAC
GAGCGGCCCC GCCGGCGCGG CCGCAAGTAG
 
Protein sequence
MTIHQDWEKA DIARFATLPQ PEMSWFKGEV HATRVATMPL SKRLFDIVLA LVLLVPLSIV 
MAVFALILLI VQGRPIFYAA PRMVAPGRTF THLKFRTMLR QEGDFGVTGA HKAWRITPLG
HFMRRTRIDE LPQLFNILKG DMSFVGPRPT IREYVERYPT VYGQVLKSRP GVTGLATLIY
HRHEDRILRR CKSAEATEAA YAGRCLPTKL KIDLIYQRNR TLALDLWIIW RTVLTVLYKD
ERPRRRGRK