Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0530 |
Symbol | |
ID | 4578717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 501116 |
End bp | 501709 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639767847 |
Product | peptidase M22, glycoprotease |
Protein accession | YP_914338 |
Protein GI | 119383282 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.364209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTGACG CGCTCTCGCT GGGCTTCGAC ACATCGGCCG CGCATTGCGC GGCCGCTTTG CTGCAAGGCG ACCGCGTCCT GTTCCATCGC CACGAAGAGA TGGCCCGCGG CCAGGCAGAG CGGCTGTTTC CGCTGCTTGA CGAGGTGCTG GCCGCGGCGG GGATCGGCTG GCGCGACCTC TCCGTCATCG GTTGCGGCAT CGGGCCCGGC AATTTCACCG GCATCCGCAT CTCGGTCGCG GCGGCGCGGG GGCTGTCGCT GTCGCTGGGC ATCCCTGCCA TCGGCGTCAG CGTGACCGAG GCCGCCGCGC ATGGCCTGCC CCGCCCCTGC CGCGTCGCGG TGCCCTCGCG CACGGGAGAG GTGATCTGGC AGGATTTCGG CACCGGGCAG GCCACCGGCC CGCAGCAATG CGCTTCGCAT GACCTGCCGC CCGGCCCGGC GCCCCTGCCG CCGGCAATGC CCTTGGCCGA GGCCATTGCC CGCTTCGCCG CCGCGCGTCG CGACCAGCCA GACCTGCCGC GTCCGGCGCC GATCTACCTG CGCCCGGCCG ACGCCGCGCC GGCGCGCGAC CGCGGCCCGT TGATCCTGTC ATGA
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Protein sequence | MADALSLGFD TSAAHCAAAL LQGDRVLFHR HEEMARGQAE RLFPLLDEVL AAAGIGWRDL SVIGCGIGPG NFTGIRISVA AARGLSLSLG IPAIGVSVTE AAAHGLPRPC RVAVPSRTGE VIWQDFGTGQ ATGPQQCASH DLPPGPAPLP PAMPLAEAIA RFAAARRDQP DLPRPAPIYL RPADAAPARD RGPLILS
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