Gene Pden_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0530 
Symbol 
ID4578717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp501116 
End bp501709 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID639767847 
Productpeptidase M22, glycoprotease 
Protein accessionYP_914338 
Protein GI119383282 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.364209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGACG CGCTCTCGCT GGGCTTCGAC ACATCGGCCG CGCATTGCGC GGCCGCTTTG 
CTGCAAGGCG ACCGCGTCCT GTTCCATCGC CACGAAGAGA TGGCCCGCGG CCAGGCAGAG
CGGCTGTTTC CGCTGCTTGA CGAGGTGCTG GCCGCGGCGG GGATCGGCTG GCGCGACCTC
TCCGTCATCG GTTGCGGCAT CGGGCCCGGC AATTTCACCG GCATCCGCAT CTCGGTCGCG
GCGGCGCGGG GGCTGTCGCT GTCGCTGGGC ATCCCTGCCA TCGGCGTCAG CGTGACCGAG
GCCGCCGCGC ATGGCCTGCC CCGCCCCTGC CGCGTCGCGG TGCCCTCGCG CACGGGAGAG
GTGATCTGGC AGGATTTCGG CACCGGGCAG GCCACCGGCC CGCAGCAATG CGCTTCGCAT
GACCTGCCGC CCGGCCCGGC GCCCCTGCCG CCGGCAATGC CCTTGGCCGA GGCCATTGCC
CGCTTCGCCG CCGCGCGTCG CGACCAGCCA GACCTGCCGC GTCCGGCGCC GATCTACCTG
CGCCCGGCCG ACGCCGCGCC GGCGCGCGAC CGCGGCCCGT TGATCCTGTC ATGA
 
Protein sequence
MADALSLGFD TSAAHCAAAL LQGDRVLFHR HEEMARGQAE RLFPLLDEVL AAAGIGWRDL 
SVIGCGIGPG NFTGIRISVA AARGLSLSLG IPAIGVSVTE AAAHGLPRPC RVAVPSRTGE
VIWQDFGTGQ ATGPQQCASH DLPPGPAPLP PAMPLAEAIA RFAAARRDQP DLPRPAPIYL
RPADAAPARD RGPLILS