| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0515 |
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| Symbol | |
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| ID | 4578702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 484673 |
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| End bp | 487606 |
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| Gene Length | 2934 bp |
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| Protein Length | 977 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767832 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_914323 |
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| Protein GI | 119383267 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAGA CTGGACCCTT TCGCCTGCCG CGCGGCGGCC GCCTGATCGA CCGCGCCTAT
CAGTTGCCCT TTCGCTTCGA CGGCCGCCAG ATGCGCGGGG TCGCGGGCGA TACGCTTGCC
TCGGCCTTGC TGGCGAACGG CCAGCTGATG ATGGGCCGCA GCTTCAAGTA TCACCGCCCG
CGCGGCCCCA TCGCCTCGGG TGCCGAAGAG CCGAACGCGC TGCTCGGCCT GGGTCAGGGC
GGCCGGTTCG AGCCGAACCA GCGCGCCACC ACCACGCCGC TGGTCGGCGG CATGGTCACC
GCCAGCCAGA ACGCCTGGCC CAGCCTGAAC GCCGATATCG GCGCGATCAA CAACTGGCTC
TATCGCTTTT TCCCGGCGGG GTTCTACTAT AAGACCTTCA TGCATCCGCG CCCGTTCTGG
AAGCATGTGT TCGAGCCGAT CATCCGCCGC TCGGCCGGCC TGGGCAAGGC GCCGACCGAG
GCCGACCCGG ACAAATACGA ACAGGCCTAT GCCCATGTGG ATGTCGTGGT GGTCGGCGGC
GGCATCGCCG GGCTGACCGC GGCGCGCGAC GCGGCCCGCG ACGGCAAGTC GGTCTGGCTG
GTCGAGCAGA CCCCGCATTT CGGCGGCCGC ACCCCCACCG ACCATGCCGA CGGCCAGGCC
CGCGTCGACG CGTTGCTGGC GGAACTGCAG GGCATGGCCA ACGTCACCCT GCGCCGCTCG
ACCCAGGCGA CGGGGCTTTA CGACCATGGC TATCTGCTGG TGCGGGAATC GCTGGCCGAT
CACGACCCGA ACGCCGGCAT TCCGCGCCAG CGCCTGTGGC GCATCCGCGC CGGCCATGTG
GTCGTCGCCA CCGGCGCGCT GGAACGGCCG CTGAGCTTTG CCGGCAACGA CGTGCCGGGC
GTGATCCTGG CCTCGGCCGT GCGCGACTAC ATCAACGATT ACGGCGTCGC GCCGGGCCGC
AGGATCGTCG TGGTGACCAA TAACGACGAC GCCTATCGCA CCGCGCTGGT GGCGCTGGAT
GCGGGGCTGG ACGTGGCCGC GGTGATCGAT GCCCGCAGCA CGGCCGAGGG TGCATTGCCC
GCGGCGGTGC GCGCGCGGGG CGTGCGCGTG CTGACCGGCA GCGCCATCGC CGGCGTCAAG
GGCGGCCACG GCGTCGAGGC GGTCAAGCTT TGCGCGCATT CCGGCTCGGG TCAGGTCACC
GAGACCATCG ATGCCGATTG CGTCGCCATG TCCGGCGGCT GGTCCCCGGT GGTGCATCTG
TGGAGCCATT GCGGCGGCAA GCTGAACTGG TCCGACGCGC AGTCGATGTT CGCCCCGGAC
CCGAACCGCC CGCCGACCGG CGCGGACGGC AAGGCGATGG CAAGCTGCGT GGGTGCGGCG
GCGGGCGACC TGCTGGTCCC GGAACTGACC GGCGCGCAGG CGGAATCGGC CACCATGCCG
GTCTGGGTCA TGCCGGCCCA CGCCCCGCGC AAGATGAAAT TCAAGATGTG GCTCGACTTC
CAGAACGACG TGAAGGTCTC GGATGTCGAA CTGGCCGCGC AGGAAGGCTA TCACAGCGTC
GAGCATACCA AGCGCTACAC CACGCTGGGC ATGGCGACCG ACCAGGGAAA GGTAAGCAAT
ATCAATGGAC TCGCCGTTCT GTCCAATGCG CTGAACCAGC CGATCCCGGC CACGGGCACG
ACGACCTTCC GCCCGCCCTA TACGCCGCTG ACCCTGGGCA CCATCGCCGG CGAGGCGCGG
GGCGAGATCT TCCAGCCCTT GCGCAAGACG CCCATGCATG GCTGGCACGA AGCGCAGGGC
GCGTTCTTCG AGCCGGTCGG CCATTGGCGC CGCCCCTATT GCTATCCGAA GGGCAGCGAA
AGCCATGGCG ACGCGGTGGC GCGCGAGATC CGGGCGGTGC GCGCCTCGGT CGGGACGCTC
GACGCCTCGA CGCTGGGCAA GATCATCGTC AAAGGACCCG ATGCGGGCAG GTACCTCGAC
ATGATGTATA CCGGCATGAT GTCCAGCCTG CCCATCGGCA AGTGCCGCTA TGGCCTGATC
TGCAGCGAGA ACGGCTTTCT CATCGACGAC GGCGTGGCCG CGCGGCTGTC CGAGGACACC
TGGCTTGTCC ACACCACCAC CGGCGGCGCC GAGCGCATGC ACGGCCATTT CGAGGACTGG
CTGCAATGCG AATGGTGGGA CTGGAAGGTC TGGACCGCCA ACGTCACCGA GCAATGGGCG
CAGGTCGCCG TGGTCGGCCC CAAGGCCCGC GTGCTGCTGG AACGGCTGGG CGGCAAGATC
GACCTTTCGC CCGAGGCGCT GCCCTTCATG GGCTGGATCG AGGGCGAGAT CGCCGGCATC
CCCGCCCGCG TCTATCGCAT CAGCTTTTCG GGCGAGCTCA GCTTCGAGGT GGCGGTGCCC
GCGAACCGGG GCCTGGAGCT TTGGGAAAAG CTGCATGAGG CCGGCCGCGA CCTGAACGTC
ACCCCCTACG GCACCGAGGC CATGCACGTC ATGCGCGCCG AAAAGGGGTT CATCATGATC
GGCGACGAAA CCGACGGCAC GGTGATCCCG CAGGATCTGG GCATGTCCTG GGCGATCAGC
AAGAAGAAGG CCGACTATAT CGGCAAGCGC GCGCAAGAGC GCAGCTTCAT GACCGATCCC
GGCCGCTGGA AGCTGGTGGG CCTGGAAAGC CTGGATGGAC GGGTGCTGCC CGACGGCGTC
TATGCGGTCG ATCAGGGCGC GAATGCCAAC GGCCAGCGCA AGGTGCAGGG CCGCGTGACC
TCGACCTACA TGTCGCCGAC CCTGGACCGG CCCATCGCCA TGGGGCTGGT GCGGCAGGGC
CCCGAGCGCA TGGGCGAGGT GCTGGAGTTC CCCGTCGCGG GTCAGGAAAG CTACAAGGCG
CGGATCGTCG ATCCGGTCTT CTACGACAAG GAAGGGAGCC GGGCGAATGG CTGA
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| Protein sequence | MTETGPFRLP RGGRLIDRAY QLPFRFDGRQ MRGVAGDTLA SALLANGQLM MGRSFKYHRP
RGPIASGAEE PNALLGLGQG GRFEPNQRAT TTPLVGGMVT ASQNAWPSLN ADIGAINNWL
YRFFPAGFYY KTFMHPRPFW KHVFEPIIRR SAGLGKAPTE ADPDKYEQAY AHVDVVVVGG
GIAGLTAARD AARDGKSVWL VEQTPHFGGR TPTDHADGQA RVDALLAELQ GMANVTLRRS
TQATGLYDHG YLLVRESLAD HDPNAGIPRQ RLWRIRAGHV VVATGALERP LSFAGNDVPG
VILASAVRDY INDYGVAPGR RIVVVTNNDD AYRTALVALD AGLDVAAVID ARSTAEGALP
AAVRARGVRV LTGSAIAGVK GGHGVEAVKL CAHSGSGQVT ETIDADCVAM SGGWSPVVHL
WSHCGGKLNW SDAQSMFAPD PNRPPTGADG KAMASCVGAA AGDLLVPELT GAQAESATMP
VWVMPAHAPR KMKFKMWLDF QNDVKVSDVE LAAQEGYHSV EHTKRYTTLG MATDQGKVSN
INGLAVLSNA LNQPIPATGT TTFRPPYTPL TLGTIAGEAR GEIFQPLRKT PMHGWHEAQG
AFFEPVGHWR RPYCYPKGSE SHGDAVAREI RAVRASVGTL DASTLGKIIV KGPDAGRYLD
MMYTGMMSSL PIGKCRYGLI CSENGFLIDD GVAARLSEDT WLVHTTTGGA ERMHGHFEDW
LQCEWWDWKV WTANVTEQWA QVAVVGPKAR VLLERLGGKI DLSPEALPFM GWIEGEIAGI
PARVYRISFS GELSFEVAVP ANRGLELWEK LHEAGRDLNV TPYGTEAMHV MRAEKGFIMI
GDETDGTVIP QDLGMSWAIS KKKADYIGKR AQERSFMTDP GRWKLVGLES LDGRVLPDGV
YAVDQGANAN GQRKVQGRVT STYMSPTLDR PIAMGLVRQG PERMGEVLEF PVAGQESYKA
RIVDPVFYDK EGSRANG
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