Gene Pden_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0480 
Symbol 
ID4579097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp450916 
End bp452154 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content66% 
IMG OID639767796 
Productmajor facilitator transporter 
Protein accessionYP_914288 
Protein GI119383232 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTG TGACCACCTC GTCCATGGAC GAATTGAAAA CCGGCTGGAA ATATCTCGTC 
GCCGCCATGG TCGGCTGCGG GTTGGGGGTT TCCTCGCTGC CGATCTATAC GGCCGGCGTC
TTCTTCCCCG CGCTCATCGC CGAATACGGC TGGAGCCGCT CGCAGCTCTC CTTCGCGGTG
CTGCTGTTCA CGCTGTCGAT CGGGGTGGCC TCACCCATCG TGGGCCGGGC GATCGACCGC
TTCGGCCCGG TGCGTTGCGC GGCGGTCTCG ATCATCTCGG CGGTGGTGCT GTATCTGGTC
CTTGCCCGTT TCGTGAACAG CCTTGCGGGC TTCTATGCCG TCCATGTCCT GATCGCGCTG
CTGGGCGCGG CGGCGGCGCC GGTGGCCTAT ACCAAGGTGA TCGCGGGCCA TTTCTCGCGG
ATGAAGGGGC TGGCCATGGG CATCACCCTG ATGGGCCCCA GCGTTGTGGC GACGGTCGCG
CCGGCCATCG TGGCGACCTC GATCGACGAC ACCAACTGGC GCGCGGGCTA CATCGCGCTG
GCGGTCATGA TGGCGATCGT CCTGCCCTTC CTGCTGCTTC TGCGCGGGCA GGGCGATGGC
GTCCAGGCTG CGCAGGCCGC CCCCGAGGAC GACAACGGCG CCTTCACCGA GGCCGAACGC
CGGAACATCT TCCGCCTGCT GATCACCGGG CTGGCGTTGT TTTCGCTCGG CATCGGCAGC
CTGATCGTGC ACCTGTCGCC GATGCTGATC GACGCGGGGC TCGAGCCGGT CACGGCGGCA
GGGATCGTCG GCTTCCTGGG CATCTCGGGG ATGGCGGGGC GCCTGATCGG CGGCTGGTTG
GCCGACCGCA TCTTCGCGGC CTACATCCTG GTCGGGGTGT CGCTGTCGGC GGCCCTGGGC
TGTCTTGCGC TGGCCATGGT CGGCGCCAGC GTGGCCATCC CCGCCACGAT CGCTATCGGC
TTTTCACTGG GCGTCGAGGC GGATCTGATG GGCTACCTGG TGTCCCGATA TTTCCGCAGG
TCCGACTACA GCAAGGTCTA TGGCTGGCAA TATGCGGCGT TCATCGGAGC CGTCGGGATC
AGTCCGCTGA TCATGGCGCG GATATTCGAT TCGCTGGGCA ACTATCAACT GGGGCTGTTC
CTGAACGTCG TGTTGTTGAC GATGGCTGCG GCGGTGTTCC GGGTGCTGCC GCGTTATGAT
AAACCTGCCG CTGTCCGGAG TTTTGCTTCA GCAGGCTGA
 
Protein sequence
MQTVTTSSMD ELKTGWKYLV AAMVGCGLGV SSLPIYTAGV FFPALIAEYG WSRSQLSFAV 
LLFTLSIGVA SPIVGRAIDR FGPVRCAAVS IISAVVLYLV LARFVNSLAG FYAVHVLIAL
LGAAAAPVAY TKVIAGHFSR MKGLAMGITL MGPSVVATVA PAIVATSIDD TNWRAGYIAL
AVMMAIVLPF LLLLRGQGDG VQAAQAAPED DNGAFTEAER RNIFRLLITG LALFSLGIGS
LIVHLSPMLI DAGLEPVTAA GIVGFLGISG MAGRLIGGWL ADRIFAAYIL VGVSLSAALG
CLALAMVGAS VAIPATIAIG FSLGVEADLM GYLVSRYFRR SDYSKVYGWQ YAAFIGAVGI
SPLIMARIFD SLGNYQLGLF LNVVLLTMAA AVFRVLPRYD KPAAVRSFAS AG