| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0472 |
|---|
| Symbol | |
|---|
| ID | 4580043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 442556 |
|---|
| End bp | 444619 |
|---|
| Gene Length | 2064 bp |
|---|
| Protein Length | 687 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639767788 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_914280 |
|---|
| Protein GI | 119383224 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTGG CAAGCGATAC CGGCGGCACC TTTACCGATC TGGTCGTCGA GGAGGACGAC
GGCCGGATCA CCATGTACAA GTCGCCTACC GTGCCCGACG ATCCGGTGTT GGGCGTGCTG
CGCGCGCTGG AACTGGCCGC CGAAGATCGG GGCCTGTCGC TGCAGGAACT GATGGCGCGC
GCCGATACAT TCATCCACGG CACCACCCAT GCGATCAACG CGATCATCAC CGGCAATGTC
GCCCGCACCG CGCTGCTGGT CACCAAAGGC CATCGCGACA TCCTGGTGTT CCGCGAGGGC
GGGCGGGTCG AGCCCTTCAA CCAGTCCATC CCGTTTCCGC GTCCCTATAT CCCGCGCGAT
CTGACCTATG AGATCCCCGA GCGGATCCTG TCGACCGGCG CGATCCATCG CGATCTGGAC
GAAGCGGCGG TGATCGGGGT GCTGCAGTCG CTGAAGGAAC AGCAGGTCGA GGCGGTGGCA
GTCTGCCTGC TCTGGGCAAC GATCAATCCG GCGCATGAGC TGCGCGTAGG CGAATTGATC
GCCGAACACC TGCCGGGCGT CCCCTATACG CTGGCCCATG ACGTCAACCC GACGCTGCGC
GAGTTTCGCC GGGCGTCCTC GGCGGCTATC GACGCCTCGC TGAAACCGCT GATGGGGCAT
TACCTCAGCG GGCTGACCGA CCGGATCCGG GGCGAGGGTT TCACCGGCGA CATCATGTTG
CTGACCAGCA GCGGTGGCAT GGTCGATGCG GCCGAGGTTG CGCGCTCGCC GATCAAGGTG
ATCAACAGCG GGCCGTCGAT GGCGCCGATC TCGGGGCATT ATTATGCGCG GGCCGAGGCG
CAGGCGGATG ACGTGATCGT CGCTGATACC GGCGGGACCA CCTATGACAT CAGTCTGGTG
AGGAAGGGCG TGGTGCCGAT CACGCGGGAA TTGTGGATCG GTCGGCCGCT GCTGGGTCAT
CTGGTCGGCT ACCCTTCGGT CGAGGTGAAA AGCGTCGGCG CGGGCGGTGG TTCCATCGCT
CATGTCGATC AGGGCGGCCT GCTGCGCGTC GGGCCGCAAA GCGCGGGCGC GAAGCCCGGG
CCGGTCTGCT ACCGGCAGGG CGGTACGAAG CCCACTGTAA CCGATGCCTC GGTCGCGCTT
GGCCATATCG ACCCGGACTT CTTCCTTGGC GGGCGTATTA AGCTGGACCG TCCCGCCGCC
ATCGAGGCGA TCCGGAAGCA GGTGGCCGAG CCGCTGGGCA TGTCGGTCGA TGAGGCGAGT
TGGCAGATCA TCGCGTTGGC GACCGAGGGC ATGGTGCAGG CCATCGCCGA TATTACCGTC
GCTCAGGGGA TCGACCCGGC CAATGCGGTG CTGATCGGCG GCGGCGGTGC GGCGGGCCTG
AACTCGACCT TCATTGCGCG CCGCTTGGGC TGCAAGTCGC TGGTGATCCC GGAAACCGGC
GCGGCGCTGT CCGCAGCGGG TGCGATGATG TCACCGCTGA TCAGCGAATA TGCGACCAGC
ATCTTCGTCT CGTCGGACCG TTTCGATCGC GAGGCACTTG CCGCCGCAAT CGAAAGGCTC
CGTGCGAAAT GCGAAGACTT CGCCAGCCGA AGCCCTGCAG CCAGCGGCGC GCCCCGGATC
AGCTTCGTCG CCGAGGCGCG ATACGAGGGG CAGGTCTGGG ATATCGATGT GAAGTTCGAC
CCTCAGAAGA TCCTTGGGCC TGACGGCAGC GAAATCTTCC GCGCCGGCTT CGACGATATG
CACGAACAGA TCTTCGCGGT GCGCGATCCC GGCTCTGCGG TCGAGATCAT CGGCATCCGC
GCCACCTTGC GCGCCGATAT CCGCCGGGAT GTCGAGTTCC GCCTGCATTC GCCGGGCGCC
CTTTCCGGTG ATCACCGGCC GCGCGAGATC TATTTCCACG GCTATGGGCG GCTGCAGACG
CCGGTCCTGC GGCTCGAGGC GATTGCGCCG GGACGGCCCG GCCAAGGCCC GGCGATCATC
GAATCCGCCT TCACCACCAT CGTCGTTGAT CCCGATGCGC GCTTTCACCG CTCGGGAACC
GGCAGCATCG TCATTCATCC GTGA
|
|---|
| Protein sequence | MRLASDTGGT FTDLVVEEDD GRITMYKSPT VPDDPVLGVL RALELAAEDR GLSLQELMAR
ADTFIHGTTH AINAIITGNV ARTALLVTKG HRDILVFREG GRVEPFNQSI PFPRPYIPRD
LTYEIPERIL STGAIHRDLD EAAVIGVLQS LKEQQVEAVA VCLLWATINP AHELRVGELI
AEHLPGVPYT LAHDVNPTLR EFRRASSAAI DASLKPLMGH YLSGLTDRIR GEGFTGDIML
LTSSGGMVDA AEVARSPIKV INSGPSMAPI SGHYYARAEA QADDVIVADT GGTTYDISLV
RKGVVPITRE LWIGRPLLGH LVGYPSVEVK SVGAGGGSIA HVDQGGLLRV GPQSAGAKPG
PVCYRQGGTK PTVTDASVAL GHIDPDFFLG GRIKLDRPAA IEAIRKQVAE PLGMSVDEAS
WQIIALATEG MVQAIADITV AQGIDPANAV LIGGGGAAGL NSTFIARRLG CKSLVIPETG
AALSAAGAMM SPLISEYATS IFVSSDRFDR EALAAAIERL RAKCEDFASR SPAASGAPRI
SFVAEARYEG QVWDIDVKFD PQKILGPDGS EIFRAGFDDM HEQIFAVRDP GSAVEIIGIR
ATLRADIRRD VEFRLHSPGA LSGDHRPREI YFHGYGRLQT PVLRLEAIAP GRPGQGPAII
ESAFTTIVVD PDARFHRSGT GSIVIHP
|
|---|
| |