Gene Pden_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0463 
Symbol 
ID4580035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp433296 
End bp434282 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content64% 
IMG OID639767780 
Productrecombinase 
Protein accessionYP_914272 
Protein GI119383216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0846568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCGCG GCAGCCGCGA GCTCTCGGTA AAGGTCTTCG CGGGCCAGTG TCGCCTGGTC 
GAACTCGGTT TTCGCCAGGG CGGCGCGCCC GGATACGGGT TGCGCCGGGT GCTGATCGAC
GAACACGGAA ACCCCAAGGG CGAACTGTCC CGCGGCGAGC AGAAGAGCCT TCAGACCGAC
AGGGTCATTC TCGTTCCCGG CCCCGAGGAC GAACAGGACG TCGTCCGGCG CATGTATCGC
ATGTTCGTCG AGGACGGCCG ATCCGAGCGC GAGATCGCGG ATGCCCTGAA CGCCGACGGA
CTGCGCACCG ATCTCGACCG GCCATGGACG CGGGCGACGG TCCATCAGGT GCTGACCAAC
GAGAAATACA TCGGCAACAA CGTCTTCAAC AAGATTTCCT TCAAGCTGAA GCAGCGCCGG
GTGGTGAACC CGCGCGAGAT GTGGATCCGC GCCGAGGGCG CCTATCCGGC CATCGTCGAT
GAGGCACTGT TCCTGCGCGC CCGGGAAATC GTCGATGCGC GCAGCCGTCA TCTTTCCGAC
CAGGACCTGC TGGACGCACT TCGGGCACTG CTTGCGAGCA AGGGCTTCCT TTCCGGGTTG
GTCATCGACG AGCACGAGGA CACGCCGTCA TCGAGCGCGT TCCGATCCCG GTTCGGCAGC
CTGCTGCGCG CCTATGAGAT GGTCGGCTAT CAGCCCGACC GGGACTACCG ATACATCAAG
ATCAACCGCA AGCTCCGCGA GGCACATCCG CAGATCGTGG CGGGTGTCAT CGCTGGGATC
GAGAACGCCG GTGGCAGCGC CGTTCAGGAT CCCCGGACCG AGATTCTGAC CGTCAACGGC
GAATTCACGG TATCGGTCGT GCTGTCGCGA TGCTTCGAGA CCGCTGCAGG CTCGCTGCGC
TGGCGCATCC GCCTCGACAC GCTTCACGGT GAACTGATGC GGTGGATGCC CCCACCCGAC
GGCATCTTGT GTGCCATGAT GGTTTGA
 
Protein sequence
MSRGSRELSV KVFAGQCRLV ELGFRQGGAP GYGLRRVLID EHGNPKGELS RGEQKSLQTD 
RVILVPGPED EQDVVRRMYR MFVEDGRSER EIADALNADG LRTDLDRPWT RATVHQVLTN
EKYIGNNVFN KISFKLKQRR VVNPREMWIR AEGAYPAIVD EALFLRAREI VDARSRHLSD
QDLLDALRAL LASKGFLSGL VIDEHEDTPS SSAFRSRFGS LLRAYEMVGY QPDRDYRYIK
INRKLREAHP QIVAGVIAGI ENAGGSAVQD PRTEILTVNG EFTVSVVLSR CFETAAGSLR
WRIRLDTLHG ELMRWMPPPD GILCAMMV