| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0459 |
|---|
| Symbol | |
|---|
| ID | 4580031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 428588 |
|---|
| End bp | 429586 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639767776 |
|---|
| Product | transposition protein, putative |
|---|
| Protein accession | YP_914268 |
|---|
| Protein GI | 119383212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.204246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATG AGCATCACAC GGCGCCCGAT CAGGTCGCGC GGATCGCCGT GTCCCTGCGC
AAGCATTTCG TGGCCCATCC GGGCTACGAA ACCGTGCGGC GGCTTTTCCG CGAGATCATG
GACAAACGCC AGGCCGAACT GGATCTTGGA CAGTCTGCCG AGGGACGCGG GATCGCGGTC
ATCGGGGAAT CCGGCAGCGG CAAGACCACT GCCATCCAGC GGATCCTGCG CCGGATTGAT
GCTGCGGACG CCGAATCTGG CGAGTTCCGC TGGATCTCCA TTCGGGTGCC GACGCCTGCC
ACCCAGAAAG ACCTCGCACG CGCGATCCTG CATGCCCTGG CTTTCCAGAT CCAGAGCAAC
ACCACGGCGT CGCGCATGTG GGAGCTGGTC AATTTTCACC TGCACCTGCG GAAATGCTGG
CTGATCCACC TCGATGAAGG CCAGGAATTG GGTGGCCGAG GCTCGGAGGT CGAGAAGGCG
GGCGTGATCA ATGCCCTGAA GAGCCTCATG CAGATCCCGG ACTGGCCGAC CAACCTGGTC
GTCAGCGGGA CACCGGAACT GCATGATCTG CTGACCCAGG ATCCACAACT GTCCCGCCGC
TTCTTCATCA CCCGCTTTCT TCCGGTGACC GAGTTCGATG CCTGCGACGA TGTTGCAGAA
CTGGTCGCCC GCTACGCCGG GCTTGCGGAT CTGCCGCTGG CGCCGGATCT GGCGGATGTG
GAGTTCGTGC CCCGGCTTCT CCATGCCGGG CGCGAACAGT TCGGAATCGT GGTCGAACTG
ATCATCGGCG CGATCACCCG CGCCCTGGCG GACGGACATC TGGCGTTGGG CATCAGGGAT
TTCGCACGGT TCTATACCGA ACGCACCGGG GATGTCGCGG GGCGGAACCC ATTCCTCGTG
CCGGATTTCC GGAGCCTGAA TACAGGGCGA TCACCGCTTG AGCCCGATCC TCCGACGGGT
TCGAAGGGGC GGTCGCGAAA ACCAAGGGGG AGGCGGTAA
|
|---|
| Protein sequence | MTNEHHTAPD QVARIAVSLR KHFVAHPGYE TVRRLFREIM DKRQAELDLG QSAEGRGIAV
IGESGSGKTT AIQRILRRID AADAESGEFR WISIRVPTPA TQKDLARAIL HALAFQIQSN
TTASRMWELV NFHLHLRKCW LIHLDEGQEL GGRGSEVEKA GVINALKSLM QIPDWPTNLV
VSGTPELHDL LTQDPQLSRR FFITRFLPVT EFDACDDVAE LVARYAGLAD LPLAPDLADV
EFVPRLLHAG REQFGIVVEL IIGAITRALA DGHLALGIRD FARFYTERTG DVAGRNPFLV
PDFRSLNTGR SPLEPDPPTG SKGRSRKPRG RR
|
|---|
| |