Gene Pden_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0449 
Symbol 
ID4578852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp420268 
End bp421179 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content57% 
IMG OID639767767 
Productexonuclease, RNase T and DNA polymerase III 
Protein accessionYP_914259 
Protein GI119383203 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTC CCCATCTCTT CAATTCTCGC GCCAGTTCCA CGGATTTGGG AGAGTATCTC 
GCTCACCGGC TATCGCAGAT TCCTGGGTAT CGGGTCTTGC GCGAACTAAG TTTTGCCGGA
CAAGTGGATG AACTCGCCCC TCGATCCACC GAAATGCGGA TTGTCGCTAT TATCGATACG
GAAACGACAG GGCTGGACCC TACCACGGAT CGGCTTGTGG AAATTGCGAT CGAACGGCTG
AGCGTCGATG CGCGGGGCCG GATCATCGAG ATGGAGCATC CCCGCTCTTG GCGCGAAGAT
CCGGGCCGGT CGATGCCTCC ACGACTGACC CTGCTTACTG GGCTTACAGA CGCAGACCTC
GCGGGATGTG CCTTTGACGA CGAGAGTATA GTAGCGCAGC TCGGAGAAGC TGACGTCATT
ATTGCACACA ACGCGGCCTT TGATCGACCG TTCGTCGACG TTCGCTTCCC AGCGCTTCAG
CATCAAGCGT GGGGATGCAG CCTCACTCAA CTAGATTGGC TCACTCTTGG CTTCGACGGA
CGCGCGCTTG GACATCTGCT GTTCCAAGCT GGGTGGTATT TTAAGGGACA TCGCGCCGAA
CAGGATGTTC ACGCCCTGGC AACGCTTCTA GGCAGCGTGG CGGGAGACGG CCGCACGATA
ATGTCCCATC TTCTCGAACG CTGCGATCGT CCGAACTTTC GCATTGCGGC CATTGGGGCT
CCCTTCAATG CCAAAGATCT ACTCAAGAGC CGGGGATATC GATGGGATCC GACGCACCGT
TATTGGTGGC GCGAAATTGA TGCTGATGTA CTCGACGGAG AAAAGGACTG GCTCGATCAC
GCGGTCTACG GAGCGACCGG TGGACATCCA ACTGTGTCAA GAATAACTGC GAGCGAGCGG
TTTGCTCGAT AA
 
Protein sequence
MKFPHLFNSR ASSTDLGEYL AHRLSQIPGY RVLRELSFAG QVDELAPRST EMRIVAIIDT 
ETTGLDPTTD RLVEIAIERL SVDARGRIIE MEHPRSWRED PGRSMPPRLT LLTGLTDADL
AGCAFDDESI VAQLGEADVI IAHNAAFDRP FVDVRFPALQ HQAWGCSLTQ LDWLTLGFDG
RALGHLLFQA GWYFKGHRAE QDVHALATLL GSVAGDGRTI MSHLLERCDR PNFRIAAIGA
PFNAKDLLKS RGYRWDPTHR YWWREIDADV LDGEKDWLDH AVYGATGGHP TVSRITASER
FAR