Gene Pden_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0326 
Symbol 
ID4578807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp309179 
End bp310213 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content68% 
IMG OID639767641 
Productluciferase family protein 
Protein accessionYP_914136 
Protein GI119383080 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAGA TTGGCGTGAA GAAGATCGGT TTCCTGTCCT TCGGCCATTG GTCGGACGAG 
CCCGCCTCGC AGGCCCGCAG CGCCCAGGAC ACGCTGCTGC AATCCATCGA GCTGGCCGTC
GCGGCCGAGG AACTGGGCGC GGACGGCGCC TATTTCCGCG TGCATCATTA TGCGCGCCAG
CTGGCCTCGC CCTTTCCGCT GCTGGCCGCG GTGGGCGCGC GCACCCAGCG CATCGAGATC
GGCACCGCCG TCATCGACAT GCGCTATGAA AACCCGCTGT ATATGGCCGA GGATGCCGGG
GCGGCCGACC TGATCTCGCA GGGGCGGCTG CAGCTTGGCA TCTCGCGCGG CTCGCCCGAG
CAGGTGATCG AGGGCTGGCG CTATTTCGGC TATACCCCGG CCGAGGAGGA AAGCGACGCC
GACATGGCCC GGCGCCATGC CGAGGTGTTC CTGAACGTGA TCGAGGGGCA CGGCTTCGCC
CGGCCGAACC CGCGCCCGAT GTTTCCGAAC CCGCCGGGCC TTCTGCGGAT CGAGCCGCAT
TCGCCGGGCC TGCGCGAGCG GATCTGGTGG GGCGCCGCCT CGAACGACAC CGCCCGCTGG
GCGGCGCAGC TGGGCATGCA TCTGCAAAGC TCGACGCTCA AGACGGACGA GAACGGCAAG
CCCTTCCACG TCCAGCAGGC CGAGCAGATC CGCGCCTATC GCGAGGCCTG GGCGGCGGCT
GGGCATGAGC GCGAGCCGAG GGTCTCGGTC AGCCGCTCGA TCTTTCCGCT GATGGACGAC
CGCGACCGGA TGTATTTCGG CCGCGGCGGC AAGGAAGCCG ATCAGATCGG CTTTATCGAG
GAAACCCGCT CGATCTTCGG CCGCGGCTAT ACTGCCGAAC CGGACCGGCT GATCGAAGAG
TTGCGCGAGG ACGAGGCCAT CGCCGAGGCC GACACCCTGC TGCTGACCGT GCCGAACCAG
TTGGGCGTCG ATTACAACGC CCATGTGATC GAGGCAGTGC TGAGCCACGT CGCCCCCGCG
CTCGGCTGGC GCTGA
 
Protein sequence
MKKIGVKKIG FLSFGHWSDE PASQARSAQD TLLQSIELAV AAEELGADGA YFRVHHYARQ 
LASPFPLLAA VGARTQRIEI GTAVIDMRYE NPLYMAEDAG AADLISQGRL QLGISRGSPE
QVIEGWRYFG YTPAEEESDA DMARRHAEVF LNVIEGHGFA RPNPRPMFPN PPGLLRIEPH
SPGLRERIWW GAASNDTARW AAQLGMHLQS STLKTDENGK PFHVQQAEQI RAYREAWAAA
GHEREPRVSV SRSIFPLMDD RDRMYFGRGG KEADQIGFIE ETRSIFGRGY TAEPDRLIEE
LREDEAIAEA DTLLLTVPNQ LGVDYNAHVI EAVLSHVAPA LGWR