Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0322 |
Symbol | |
ID | 4578803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 304074 |
End bp | 305642 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639767637 |
Product | allophanate hydrolase subunit 2 |
Protein accession | YP_914132 |
Protein GI | 119383076 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.751903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGCAGGTG TGACCATGCG CTTTCTGCCC ATCGGGCCCC GCACCCTGCT GGCGGAACTG GACGACCTGG ACCAGACGCT GGCGCTGTTC GACGCGCTCT TGGCCGATCC GGTGCCGGGC GTGGCCGAGA TTGTTCCGGC CGCCCGCACG CTGATGATCC GCACCGCGCC GGGCGTTGCC GCCGACGCGC GGCTGGCCGG CGCGATCCTC GCCCGCCAGC CTGCCCCCGG CACACAGCCC AACGCGCGCG CCAGCGAGAC GGTCGAGCTG CCGGTGACCT ATGACGGCGA GGACCTGGCC GATGTCGCGG CCCATATGGG CCTGACCGAG GCCGAGGTGA TCGCCGCCCA TCAGGAAACC ATCTGGCAGG TGGCCTTTTG CGGCTTCGCG CCCGGTTTCG CCTATATGAC CTGCGATGAT CCGCGCTTCG ACCTGCCGCG CCGCCCGGCG CCGCGGACAC GTATTCCGGC GGGCTCGGTG GCACTGGCCG GGCGCTTTTG CGGCGTCTAT CCGCAGGAGA CCCCCGGCGG TTGGCAGCTG ATCGGCCGGA CCGAGGTGCC GATGTGGGAT CTGTCCCGCG ACCCGCCCGC GCTGCTGCGC CCCGGTGTGC GCTGCCGCTT TGTGGCGCGC CGGGCCGAGG TTCACGCCTC GGCCACCATC CCGCAGCCGC AGCCCGAGCA GGGCCTGCGC CTGCTCTCCA CCGCCTTTCC CATCGTCTTT CAGGACGAGG GGCGGCCGGG GCAGGGCGGG CAGGGCGTCT CGGCCTCGGG TGCGCTGGAC ATGGGCGCGG CGCGCCGGGC CAATCGCGCC GTCGGCAACC CCTCGGACAC GCCGGTTCTG GAGATCACGC TGGGCCCCGT TCGCCTGCGG GCCGACCAGC CGATGACGCT GGCCCTGACC GGCGCGTCAC AGGCCAGCAT CGCCGGTCAT GCCGTTCCGC ACGGTGCAGC CTTTGCCGTG GATGCGGGCG ACGAAATCAC CATTGCCCCA CCCGGCGCGG GCATGCGCAG CTACCTTGCC CTGCGCGGCG GGTTCCGGGT CGCGCCGGTT CTGGGCTCGG CCGCCACCGA TACGCTGGCC CATGTCGGCC CCGAGCCGGT GGTGGCAGGC ACCGTGCTGG CCGTCGCGAA CCATTCCGCC GTCGCCGCAG CCGCGGCCGA GGCCGAACCC GCGTTGCCGA AACCCGGCGA TCTGGTGGAA CTGCCGGTGA CGCTTGGCCC CCGCGCCGAC TGGTTCACGC CGGACATGGT GCGGCATTTC CTGACCCAGG AATGGCTGGT GACGCCGCAA AGCTCGCGCG TCGGCATCCG CCTGCAAGGC GATGCGGTGA CGCGCGAGGA TGCGGTCGAG CTGCCCTCGG AAGGGACCGA GACCGGCGCC ATCCAGATCC CGCATTCCGG CCAGCCGGTG CTGTTTCTGG CCGACCATCC GCTGACCGGC GGCTATCCGG TCATCGCCAC CCTGCGCCCC GAGGCGCTGG ACCTGGCCGG GCAGATCCCG CCCGGCGCCC GCATCCGCTT TACCGCCAGC GCCGATTTCG CACCCATCAC GCCAGAGAGG CCCGCATGA
|
Protein sequence | MAGVTMRFLP IGPRTLLAEL DDLDQTLALF DALLADPVPG VAEIVPAART LMIRTAPGVA ADARLAGAIL ARQPAPGTQP NARASETVEL PVTYDGEDLA DVAAHMGLTE AEVIAAHQET IWQVAFCGFA PGFAYMTCDD PRFDLPRRPA PRTRIPAGSV ALAGRFCGVY PQETPGGWQL IGRTEVPMWD LSRDPPALLR PGVRCRFVAR RAEVHASATI PQPQPEQGLR LLSTAFPIVF QDEGRPGQGG QGVSASGALD MGAARRANRA VGNPSDTPVL EITLGPVRLR ADQPMTLALT GASQASIAGH AVPHGAAFAV DAGDEITIAP PGAGMRSYLA LRGGFRVAPV LGSAATDTLA HVGPEPVVAG TVLAVANHSA VAAAAAEAEP ALPKPGDLVE LPVTLGPRAD WFTPDMVRHF LTQEWLVTPQ SSRVGIRLQG DAVTREDAVE LPSEGTETGA IQIPHSGQPV LFLADHPLTG GYPVIATLRP EALDLAGQIP PGARIRFTAS ADFAPITPER PA
|
| |