Gene Pden_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0322 
Symbol 
ID4578803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp304074 
End bp305642 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content72% 
IMG OID639767637 
Productallophanate hydrolase subunit 2 
Protein accessionYP_914132 
Protein GI119383076 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370
[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.751903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCAGGTG TGACCATGCG CTTTCTGCCC ATCGGGCCCC GCACCCTGCT GGCGGAACTG 
GACGACCTGG ACCAGACGCT GGCGCTGTTC GACGCGCTCT TGGCCGATCC GGTGCCGGGC
GTGGCCGAGA TTGTTCCGGC CGCCCGCACG CTGATGATCC GCACCGCGCC GGGCGTTGCC
GCCGACGCGC GGCTGGCCGG CGCGATCCTC GCCCGCCAGC CTGCCCCCGG CACACAGCCC
AACGCGCGCG CCAGCGAGAC GGTCGAGCTG CCGGTGACCT ATGACGGCGA GGACCTGGCC
GATGTCGCGG CCCATATGGG CCTGACCGAG GCCGAGGTGA TCGCCGCCCA TCAGGAAACC
ATCTGGCAGG TGGCCTTTTG CGGCTTCGCG CCCGGTTTCG CCTATATGAC CTGCGATGAT
CCGCGCTTCG ACCTGCCGCG CCGCCCGGCG CCGCGGACAC GTATTCCGGC GGGCTCGGTG
GCACTGGCCG GGCGCTTTTG CGGCGTCTAT CCGCAGGAGA CCCCCGGCGG TTGGCAGCTG
ATCGGCCGGA CCGAGGTGCC GATGTGGGAT CTGTCCCGCG ACCCGCCCGC GCTGCTGCGC
CCCGGTGTGC GCTGCCGCTT TGTGGCGCGC CGGGCCGAGG TTCACGCCTC GGCCACCATC
CCGCAGCCGC AGCCCGAGCA GGGCCTGCGC CTGCTCTCCA CCGCCTTTCC CATCGTCTTT
CAGGACGAGG GGCGGCCGGG GCAGGGCGGG CAGGGCGTCT CGGCCTCGGG TGCGCTGGAC
ATGGGCGCGG CGCGCCGGGC CAATCGCGCC GTCGGCAACC CCTCGGACAC GCCGGTTCTG
GAGATCACGC TGGGCCCCGT TCGCCTGCGG GCCGACCAGC CGATGACGCT GGCCCTGACC
GGCGCGTCAC AGGCCAGCAT CGCCGGTCAT GCCGTTCCGC ACGGTGCAGC CTTTGCCGTG
GATGCGGGCG ACGAAATCAC CATTGCCCCA CCCGGCGCGG GCATGCGCAG CTACCTTGCC
CTGCGCGGCG GGTTCCGGGT CGCGCCGGTT CTGGGCTCGG CCGCCACCGA TACGCTGGCC
CATGTCGGCC CCGAGCCGGT GGTGGCAGGC ACCGTGCTGG CCGTCGCGAA CCATTCCGCC
GTCGCCGCAG CCGCGGCCGA GGCCGAACCC GCGTTGCCGA AACCCGGCGA TCTGGTGGAA
CTGCCGGTGA CGCTTGGCCC CCGCGCCGAC TGGTTCACGC CGGACATGGT GCGGCATTTC
CTGACCCAGG AATGGCTGGT GACGCCGCAA AGCTCGCGCG TCGGCATCCG CCTGCAAGGC
GATGCGGTGA CGCGCGAGGA TGCGGTCGAG CTGCCCTCGG AAGGGACCGA GACCGGCGCC
ATCCAGATCC CGCATTCCGG CCAGCCGGTG CTGTTTCTGG CCGACCATCC GCTGACCGGC
GGCTATCCGG TCATCGCCAC CCTGCGCCCC GAGGCGCTGG ACCTGGCCGG GCAGATCCCG
CCCGGCGCCC GCATCCGCTT TACCGCCAGC GCCGATTTCG CACCCATCAC GCCAGAGAGG
CCCGCATGA
 
Protein sequence
MAGVTMRFLP IGPRTLLAEL DDLDQTLALF DALLADPVPG VAEIVPAART LMIRTAPGVA 
ADARLAGAIL ARQPAPGTQP NARASETVEL PVTYDGEDLA DVAAHMGLTE AEVIAAHQET
IWQVAFCGFA PGFAYMTCDD PRFDLPRRPA PRTRIPAGSV ALAGRFCGVY PQETPGGWQL
IGRTEVPMWD LSRDPPALLR PGVRCRFVAR RAEVHASATI PQPQPEQGLR LLSTAFPIVF
QDEGRPGQGG QGVSASGALD MGAARRANRA VGNPSDTPVL EITLGPVRLR ADQPMTLALT
GASQASIAGH AVPHGAAFAV DAGDEITIAP PGAGMRSYLA LRGGFRVAPV LGSAATDTLA
HVGPEPVVAG TVLAVANHSA VAAAAAEAEP ALPKPGDLVE LPVTLGPRAD WFTPDMVRHF
LTQEWLVTPQ SSRVGIRLQG DAVTREDAVE LPSEGTETGA IQIPHSGQPV LFLADHPLTG
GYPVIATLRP EALDLAGQIP PGARIRFTAS ADFAPITPER PA