| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0315 |
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| Symbol | |
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| ID | 4579711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 295835 |
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| End bp | 297919 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639767630 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_914125 |
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| Protein GI | 119383069 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases
[COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.596905 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGG ACCTGCGCAT CGCCATTCTG GGGGCCGGCT ACATCGCCTC GTGGCATGCC
GATGCGATCA AGGCCGCGCC GGGCGCACGG CTGGTCGCGG TCTGCGATCC CGCCCGCGAC
GCGGCCGAGG CGCTGGCCGC CAGCCATGGC GTCGCGGCCT TTACCGACCT GGACCAGATG
ATCGCGGCCG GGGTCTGCGA CGTGGTGCAT ATCCTGACGC CGCCGAACCT GCATCGCGAC
CTGGCGGTGC AATGCCTGAA CGCCGGCCTG CATGTGCTGG TCGAGAAGCC CGTGGCGCTC
TCGGTCGCCG AGATCGACGA GATGGAAGCG GCCGCCACGG CCGCCGGCCG CCAGTTGGGC
GCCTGCCACA ACTTCCTGGG CCTGCCGGGT TACGAACGGC TGAAACGGGC GGTTCAGGCG
GGCGAGCTGG GCCTGGTCTC CAGCGCGCAG ATCAACTGGT CGCTGCCGCT GGTGCCGCTG
CGCTCGGGGC CCTATGGGCT GTGGATGCTG CGCGAGACGC AGAACCTGCT CTTGGAGCTT
GGCCCGCACC CCTTCTCGTT CGCCGTGGAC CTGTTCGGCC CGCTGGAGGT CGAGCATGTC
AGCCTTGGCC AATGGATCAC CCTGCCCGGC GGCGAGCAGC GGCCGCAAAG CTGGCGCATC
CTGGCCCGCG CCGGCAAGGT GGACGTGACC ATCGCCCTGT CGCTGGTCGA GACCTTTGAC
GACCGCTCGC TCAGCTTGCG CGGCTCGTCC GGCATGGCGC GGCTGGACTA TGCGGCGGAT
GCACTGGTTC TGACGCGCGA CAATACCGCC GACCTGGTGC TGAACCCGCT GGTCAAGGAA
CTGTCCCGCT CTGGCGCGCA TCTGCGCGAA GGGGTGCGCA ACGCCTTGCG CCAGGCCGCC
TCGCTGAACC AGAAAAGCCC CTATGGGCTA AGCTTCCGCG CCACCATCGC GGCGTTCTAC
GACGGCATCC GCGCCGGCCG GCCCGATCCG CGCTTTGCGC CCTCTTCGGC CCGGGCGGTG
ATGCAGGGCA TCGGGGACGC ACTGGCCTGC CTGCCCGCCC TGCCCCCGGT CCCGGCCCGG
CCCATCGGCA CGCCGCAGCC GCGCGTGATG GTGATCGGCG GCACCGGCTT CATCGGCCGC
AACCTGACCC GGCGGCTGGT CGAGCGCGGC CATGACGTGC GCGTGCTGTC GCGCGGCCGG
AACGGCCCCT TCCCCGACAT CGCCGATCAT GTCGAGACGC TGGGTATCTC GCTGCATGAC
GAGGAGGGGC TGGCCGCGGC GATGCAGGGC ATGGATTGCG TCTTCAACCT GGCGAAATCG
ACCGACAAGA GCTGGCAGGC GGCGCTGGAC AACGACGTGG CCACGACCGA GCGCATCGGC
CGCGCCGCGA TCCGCTCCGG CGTCGGGCGG CTGGTCCATA CCGGCACCAT CGCCTCCTAC
GACATGTCGG ACCCTGCCCG CACCATCACC GAGGCGACCG ATTTCGGCGC CATGGACAGC
CGCAACATCT ATGCACGGTC CAAGGCCGAG GGCGAGCGCC GGCTGATCGC CATGCAGGCG
CAGGGCCTGC GGCTGGCGAT CGCGCGGCCC GGCATCGTGC TGGGCGACGG CGGCCCCTTG
CAGCATTGGG GCATCGGCCG CTGGCATGGC GCCGGGGCGG TCAGGCTGTG GGGCAACGGC
CGCAACATCC TGCCCTTCGT GCTGGCCGAC GACGTGTCGG ACGGGCTGAT CGCCATGATG
GAACGGGACG AAGCCATCGG CGAAAGCTTC AACCTGATCG GCGAGCCGAT GTTCTCGGGG
CGCGACTATT TCGACGCCAT CCATCGCCGC ACCGGGGCGC GGCTGAAGGT CAGCGGCTCG
AACCTGACCG CGCTCTGGGC GGTCGATGCG GTCAAGCAGG GGCTGAAGCG CCACGCACTG
CGCCGCAAGG GTGCCGCGCC CGCCTCGTTG GCGGACTGGA AGTCGCGCGG GCATCTGTCG
CCCTTCGACA ACGGCAAACC CAAGCGCCTG CTGGGTTGGG CGCCCGAGGC CGACCGCGAC
GCCTTCTGGC GCCGCGCCAT CGACGAGGCG CATCTGTTCT GGTGA
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| Protein sequence | MTSDLRIAIL GAGYIASWHA DAIKAAPGAR LVAVCDPARD AAEALAASHG VAAFTDLDQM
IAAGVCDVVH ILTPPNLHRD LAVQCLNAGL HVLVEKPVAL SVAEIDEMEA AATAAGRQLG
ACHNFLGLPG YERLKRAVQA GELGLVSSAQ INWSLPLVPL RSGPYGLWML RETQNLLLEL
GPHPFSFAVD LFGPLEVEHV SLGQWITLPG GEQRPQSWRI LARAGKVDVT IALSLVETFD
DRSLSLRGSS GMARLDYAAD ALVLTRDNTA DLVLNPLVKE LSRSGAHLRE GVRNALRQAA
SLNQKSPYGL SFRATIAAFY DGIRAGRPDP RFAPSSARAV MQGIGDALAC LPALPPVPAR
PIGTPQPRVM VIGGTGFIGR NLTRRLVERG HDVRVLSRGR NGPFPDIADH VETLGISLHD
EEGLAAAMQG MDCVFNLAKS TDKSWQAALD NDVATTERIG RAAIRSGVGR LVHTGTIASY
DMSDPARTIT EATDFGAMDS RNIYARSKAE GERRLIAMQA QGLRLAIARP GIVLGDGGPL
QHWGIGRWHG AGAVRLWGNG RNILPFVLAD DVSDGLIAMM ERDEAIGESF NLIGEPMFSG
RDYFDAIHRR TGARLKVSGS NLTALWAVDA VKQGLKRHAL RRKGAAPASL ADWKSRGHLS
PFDNGKPKRL LGWAPEADRD AFWRRAIDEA HLFW
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