Gene Pden_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0298 
Symbol 
ID4579694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp279006 
End bp279965 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID639767613 
Producttransport system permease protein 
Protein accessionYP_914108 
Protein GI119383052 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4605] ABC-type enterochelin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCATG AGCGTCGCGC AAGGCTGGCC CTGCTGGTCC TGGCCCTGCT GGCCCTGAGC 
GCGATCCTCG CCTTCATGAC GCTGGGCGCG CGCGGCAACT GGGGCTTCGT GCTGCCGTTT
CGCGGCAAGA AGCTTTTGGG CCTGCTGCTG GTCGGCCACG CCGTCGCCTG CTCGACGGTG
CTGTTCCAGA CCGTGACCGC GAACCGCATC CTGACCCCGG CGATCATGGG GTTCGATTCG
CTGTTCGTGC TGTGCAGCAC GGTGCTGATG GCTCTGTTCG GCTCGACCAT GGTGGCGGGG
CTGGACCCAC GGCTGGTCTT TGCCGGCAAC GTCCTGCTGA TGGTCGGGGC CTCGATGGCG
CTTTACCTGT GGCTTTTCGG CGGCGAGGAA CGCAGCCTGC ACCGCCTGCT GCTGATCGGC
GTGGTCTTTG GCATCTTCCT GCGCATGCTG GCGGAATTCG TCCAGCGCAT GCTGGACCCG
AACGAGTTCA TGGTGCTGTC GGACATGCTG TTCGCCAGTT TCGGCACCAT TCCCGCAACA
CTGCTGGGCA TCGCCAGCGC CATGGTCGCG GGCGTGACGC TGTGGCTGAT GCCGCGCCTG
TCGCGGCTGG ACGTGATCGC GCTTGGCCGG CCGGTGGCGG TGAACCTGGG CATCCGCTGG
CGGGCCGAGG TGCTGGCGGT CCTGGCGGCG GTCTCGGTGC TGGTCGCGGT CTCGGCGGCG
CTGGTCGGGC CGGTGCTGTT CTTCGGCCTG ATCGCGGCCA GCCTGGCGCA TCTGGCGGTC
GGGCAATCGG CGCATCGCTA CCTGCTGCCC GCCGCCTCGC TGATCGGCGT CACCATGCTG
GTCGGCGGCC AGACCGTGCT GGAGCGGGTC TTTGCCTTCA ATACCGCGCT TGGCATCATC
GTCGAATTCG CCGGGGGCAT CACCTTCATC GCGCTATTGA TCGGAAAGGG CCGCCGATGA
 
Protein sequence
MPHERRARLA LLVLALLALS AILAFMTLGA RGNWGFVLPF RGKKLLGLLL VGHAVACSTV 
LFQTVTANRI LTPAIMGFDS LFVLCSTVLM ALFGSTMVAG LDPRLVFAGN VLLMVGASMA
LYLWLFGGEE RSLHRLLLIG VVFGIFLRML AEFVQRMLDP NEFMVLSDML FASFGTIPAT
LLGIASAMVA GVTLWLMPRL SRLDVIALGR PVAVNLGIRW RAEVLAVLAA VSVLVAVSAA
LVGPVLFFGL IAASLAHLAV GQSAHRYLLP AASLIGVTML VGGQTVLERV FAFNTALGII
VEFAGGITFI ALLIGKGRR