Gene Pden_0274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0274 
Symbol 
ID4578912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp251590 
End bp252849 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content63% 
IMG OID639767589 
Producthypothetical protein 
Protein accessionYP_914084 
Protein GI119383028 
COG category 
COG ID 
TIGRFAM ID[TIGR01541] phage tail tape measure protein, lambda family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCCG GGGTGAAGTG GGTCGGCAAT ATGCTGATCA ACGGCATCAA GGCTGCGGTC 
AGTGGTATCC GCGCCGCCGT CGATGCGATC CCGCTGCTGT TCGAGCAGGG CTTTGAAAAG
GCGAAGGCGG TCGCGCTCAA GGCACTCGGC GGGATCATGG ATGGCATCGG CACCATGATC
AACGGGATCG CGACGGCCTG GGATACCCTT TTCGGCACCA ACCTTGCGGG CAGCAACGCG
GCCTGGGGAA TCGGCGCTCA GCTTGAGGAT ATGGCCGGGG TTGCAGAGGC GAAAGCCATG
ACGGCCGGTG CCAAAGCCCG GCGGGGCCTC GAGGCTGGCC TGGGGGATAT CCGAGATATC
ATGAGCGAAG ACCCTATGGG GGATTTCTTC GACCGGGTTC GGGAACAGGC CATCAAGAAC
GCCATCGACC GCCAGAAGGA TGACAAAAAG AAGAAGGGCG GCGGTAAGTC GAAGAGGGAG
GAGAAGGACG AAGCCGACGA GTTGATCAAA TCGCTTGAGC GGGAGTTGGC CGTTCTGAAG
GAGACGGACC CGATCAAGAA GAAGATGCTG GAATATTCCA AGCAACTGAA GGACGCGACC
GCCGAGCAGA AGGCAAAGGT GCTGGAACTC GTGACCGCGC TTGATCAGGA AAAAACCGGC
TGGAACGCAA TCGGCCGGTC GCTTGCCGAG TATGCTGAGG AGGCGAAGCG CATTGGCGAC
GATATCGGGG ATGCTCTCGT TGGCGCATTC GACGGCGCTG CTGCCGCGGT CGGTGAATTC
GTCAAAACCG GCAAGGCAGA TTTTTCCGAT CTGATCACCT CCATGCTGGG TGATCTGGCG
AAGCTGGCGG CGCAGCGGTA TATCACCGGC CCCTTGGCCG GCCTTGTTTC CGGCTTTTTC
GATCCGCTCG GCGCAGCCCT GAAGGGCGCG GGCCTGAATC CTGTTTCGGT GATGCATACC
GGCGGCAAGG GCGGCGGCGC ATTGCGCTAC GTCTCTGCCG CCAACTTCGC CAACGCCCCT
CGCCTGCACA ACGGGACACC GCTCGGCCTC CGCTCGGACG AATATGCCGC GATCCTTCAG
CGCGGTGAGC GGGTGCTGAA CCGCCGGCAG ACCCGCGATT GGGAGGACCG GCATTTCGGC
GGCGGCTCTG CACCCATCAT CAACTTCAAC GTGCGGGATG CGCAGAGCAT CCGCCAGTCG
CGGACGCAAC TGGCGGCTGA CGCCTCCCGC ATGCTGTCCA TGGCCGGACG AGGCAGGTAA
 
Protein sequence
MAAGVKWVGN MLINGIKAAV SGIRAAVDAI PLLFEQGFEK AKAVALKALG GIMDGIGTMI 
NGIATAWDTL FGTNLAGSNA AWGIGAQLED MAGVAEAKAM TAGAKARRGL EAGLGDIRDI
MSEDPMGDFF DRVREQAIKN AIDRQKDDKK KKGGGKSKRE EKDEADELIK SLERELAVLK
ETDPIKKKML EYSKQLKDAT AEQKAKVLEL VTALDQEKTG WNAIGRSLAE YAEEAKRIGD
DIGDALVGAF DGAAAAVGEF VKTGKADFSD LITSMLGDLA KLAAQRYITG PLAGLVSGFF
DPLGAALKGA GLNPVSVMHT GGKGGGALRY VSAANFANAP RLHNGTPLGL RSDEYAAILQ
RGERVLNRRQ TRDWEDRHFG GGSAPIINFN VRDAQSIRQS RTQLAADASR MLSMAGRGR