| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0246 |
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| Symbol | |
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| ID | 4579739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 228259 |
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| End bp | 229149 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639767561 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_914056 |
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| Protein GI | 119383000 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.483047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.792489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGTCC GCCGCGCCGC AAGCGTGCCG GGTTTGAGCC ACGTCGATCT CAACTATCCG
GACCATGTGC TTGAAGAACC CAAGGTCGTG CAGGCAGAGG TCAACGATCT GGGGCTCCAG
GTGAACGGCC TGGCCATGCG CTACTACACC AACCCGGCCT TAAAGCTGGG CGCCTTTACC
AACCCCGACC GCGCGGTGCG GCAGGAAGCC ATCGACCTGA CCAAGCGCGG GATCGACGCG
GCGCTGGAGA TGGGCGCCCC CCTGATGACG CTGTGGCTAG GCCAAGACGG TTTCGACTAC
AGTTTTCAGG GCGACTATCC GCGCATGTGG GAGGACGAGA TCGGCGGTAT CCGCGAGGTG
GCCGAACACG CACCCGACTG CATGATCTCC ATCGAGTACA AGCCTAACGA ACCGCGGTCC
TATGCGCTGT TGCCCGACGT CGCCACGACC CTGCTGGCGA TCGCGGAAAC CGGATGTGGC
AATATCGGCG TGACGCTGGA CTTCGCCCAT GTGCTTTATG CCGACGAAAT GCCCGCCTAC
GCCGCCACGC TGATCGCGCG GAAATCGCGG CTGCTGGGCG TGCATCTGAA CGACGGCTAT
GCCAAGCGCG ACGACGGGTT GATGGTCGGC AGCGTCCATC CGCAAGCCAC GCTGGAATTG
CTGTGGCAGA TCACCCGCGA CGGATATGAC GGCGTAATCT ATTTCGACAC TTTCCCCGAC
GCCTCGGGCA TCGATCCGGT CGAGGAATGC CGCACCAATA TCGAGACTGT CGAGCGTTTC
ATGAACATGG TTCCACGCCT GAACGCCGAC AACCTGCTGC ATGACGCCAT TGCCGGGCAG
AACTCTCCGC TCAGCCAGCG TGCCGTCGCA CGCATCATGA GCGGAGCCTG A
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| Protein sequence | MMVRRAASVP GLSHVDLNYP DHVLEEPKVV QAEVNDLGLQ VNGLAMRYYT NPALKLGAFT
NPDRAVRQEA IDLTKRGIDA ALEMGAPLMT LWLGQDGFDY SFQGDYPRMW EDEIGGIREV
AEHAPDCMIS IEYKPNEPRS YALLPDVATT LLAIAETGCG NIGVTLDFAH VLYADEMPAY
AATLIARKSR LLGVHLNDGY AKRDDGLMVG SVHPQATLEL LWQITRDGYD GVIYFDTFPD
ASGIDPVEEC RTNIETVERF MNMVPRLNAD NLLHDAIAGQ NSPLSQRAVA RIMSGA
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