Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0230 |
Symbol | |
ID | 4580810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 210655 |
End bp | 211734 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639767545 |
Product | luciferase family protein |
Protein accession | YP_914040 |
Protein GI | 119382984 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03571] luciferase-type oxidoreductase, BA3436 family |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCG GAAAAGGGAT GCGCGACCGC TGCGCCGCAT ATCCCGAAAG TGGAATCGAC ATGACAACAA CTGCCACACT GGGCGCCCTG GCACCCGAAC TTGCCACGCA TCGCGGCTAT TCGCGCGTTT TCCAGCCCGG ACGCCTGACA TTCGGCTTCA TCGCGCCGCT TGAAAGCTAT CCCGACAGCG TGGGCCCGAC ATTGGTCGGT CACGCTACTA TGGCGCAAAA GGTGGACGAA GCCGGATTTT CCGCGATCTG GCTGCGCGAC GTGCCGTTCC ATGACCCCAA TTTCGGTGAT GTCGGCCAGG TTCTCGATCC GCTGGTCTAT GCGGGCTATC TGGCGGCCGT CACCCGGAAG ATCGCGATCG GCACCGCAGG CATCGTGCTG CCGTTGCGCG ATCCGCTGAT CGTCGCCAAG CAGGCTGCCA CGATCGACCA GTTGCTGGGC GGACGTTTCC TGCTGGGACT GGCCACCGGC GACCGTGCGG TCGAATATCC GGCCTTCGGC ATCGACTATG ACAATCGCGC CGATCGCTTT CGCGACGCGC TTGCCATGAT CCGGGCCACG ACCGAGCAGG CCTGGCCGGT CCATGCCTCG CATTTCTACG GCATGCTGGA CGGTGGGCTT GATCTGGTGC CGAAACCGGC GGCGCCGCGC CTGCCGACCA TCATCATCGG CCATGCCGGT CAGTCGCTGG ACTGGACCGC CCAGAATACC GACGGCATCC TGTCCTATAT CGCCAGCCCC GCGCGCATTC CCGACATCAT CCGGCAATGG CGCGCCGCCA GCCCGGCGAA TGTGTTCAAG CCCTATGGCT ATGGAACGCT GTTCGATCTG GACCGCGACC CGGACATGCC GATACAGCCG GGCCGCGTCC TTCGCGGCGG CCGAAACGCC CTGCGCGAGC TGTGGCTTCG CCAGCAGGAC ATTGGCGTCT CGCATGTCGG CCTGCATTTC AAGCCGCAAC GGCGGCCGGC ATCGGAAGTC ATCGACGAGC TTGGCACCCA TCTGCTGCCG CTGTTCCCCA GCCACGAGCC CGAAGTCAAC AAAGCCACCG CCGCCGGGGG CCGCGCATGA
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Protein sequence | MTTGKGMRDR CAAYPESGID MTTTATLGAL APELATHRGY SRVFQPGRLT FGFIAPLESY PDSVGPTLVG HATMAQKVDE AGFSAIWLRD VPFHDPNFGD VGQVLDPLVY AGYLAAVTRK IAIGTAGIVL PLRDPLIVAK QAATIDQLLG GRFLLGLATG DRAVEYPAFG IDYDNRADRF RDALAMIRAT TEQAWPVHAS HFYGMLDGGL DLVPKPAAPR LPTIIIGHAG QSLDWTAQNT DGILSYIASP ARIPDIIRQW RAASPANVFK PYGYGTLFDL DRDPDMPIQP GRVLRGGRNA LRELWLRQQD IGVSHVGLHF KPQRRPASEV IDELGTHLLP LFPSHEPEVN KATAAGGRA
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