Gene Pden_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0230 
Symbol 
ID4580810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp210655 
End bp211734 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content65% 
IMG OID639767545 
Productluciferase family protein 
Protein accessionYP_914040 
Protein GI119382984 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID[TIGR03571] luciferase-type oxidoreductase, BA3436 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCG GAAAAGGGAT GCGCGACCGC TGCGCCGCAT ATCCCGAAAG TGGAATCGAC 
ATGACAACAA CTGCCACACT GGGCGCCCTG GCACCCGAAC TTGCCACGCA TCGCGGCTAT
TCGCGCGTTT TCCAGCCCGG ACGCCTGACA TTCGGCTTCA TCGCGCCGCT TGAAAGCTAT
CCCGACAGCG TGGGCCCGAC ATTGGTCGGT CACGCTACTA TGGCGCAAAA GGTGGACGAA
GCCGGATTTT CCGCGATCTG GCTGCGCGAC GTGCCGTTCC ATGACCCCAA TTTCGGTGAT
GTCGGCCAGG TTCTCGATCC GCTGGTCTAT GCGGGCTATC TGGCGGCCGT CACCCGGAAG
ATCGCGATCG GCACCGCAGG CATCGTGCTG CCGTTGCGCG ATCCGCTGAT CGTCGCCAAG
CAGGCTGCCA CGATCGACCA GTTGCTGGGC GGACGTTTCC TGCTGGGACT GGCCACCGGC
GACCGTGCGG TCGAATATCC GGCCTTCGGC ATCGACTATG ACAATCGCGC CGATCGCTTT
CGCGACGCGC TTGCCATGAT CCGGGCCACG ACCGAGCAGG CCTGGCCGGT CCATGCCTCG
CATTTCTACG GCATGCTGGA CGGTGGGCTT GATCTGGTGC CGAAACCGGC GGCGCCGCGC
CTGCCGACCA TCATCATCGG CCATGCCGGT CAGTCGCTGG ACTGGACCGC CCAGAATACC
GACGGCATCC TGTCCTATAT CGCCAGCCCC GCGCGCATTC CCGACATCAT CCGGCAATGG
CGCGCCGCCA GCCCGGCGAA TGTGTTCAAG CCCTATGGCT ATGGAACGCT GTTCGATCTG
GACCGCGACC CGGACATGCC GATACAGCCG GGCCGCGTCC TTCGCGGCGG CCGAAACGCC
CTGCGCGAGC TGTGGCTTCG CCAGCAGGAC ATTGGCGTCT CGCATGTCGG CCTGCATTTC
AAGCCGCAAC GGCGGCCGGC ATCGGAAGTC ATCGACGAGC TTGGCACCCA TCTGCTGCCG
CTGTTCCCCA GCCACGAGCC CGAAGTCAAC AAAGCCACCG CCGCCGGGGG CCGCGCATGA
 
Protein sequence
MTTGKGMRDR CAAYPESGID MTTTATLGAL APELATHRGY SRVFQPGRLT FGFIAPLESY 
PDSVGPTLVG HATMAQKVDE AGFSAIWLRD VPFHDPNFGD VGQVLDPLVY AGYLAAVTRK
IAIGTAGIVL PLRDPLIVAK QAATIDQLLG GRFLLGLATG DRAVEYPAFG IDYDNRADRF
RDALAMIRAT TEQAWPVHAS HFYGMLDGGL DLVPKPAAPR LPTIIIGHAG QSLDWTAQNT
DGILSYIASP ARIPDIIRQW RAASPANVFK PYGYGTLFDL DRDPDMPIQP GRVLRGGRNA
LRELWLRQQD IGVSHVGLHF KPQRRPASEV IDELGTHLLP LFPSHEPEVN KATAAGGRA