Gene Pden_0223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0223 
Symbol 
ID4580803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp203895 
End bp205325 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content68% 
IMG OID639767538 
Productsuccinate-semialdehyde dehydrogenase (NAD(P)(+)) 
Protein accessionYP_914033 
Protein GI119382977 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACAC AAGCGGGGTT GATCATCGGC GGCGAAAGTC GCGCAACGGG CAGCGAGGGG 
GTGCTGGAAA TCACCGATCC CGCCACCGAC GAGGTGCTGG CAAGCCTGCC GAAGGCGGGC
CTTGCCGAGG TGGCCGAGGC AACCGAAGCC GCACTTCAGA GCTTTGCCGA CTGGTCGGCG
GTGTCGCCCT ATGACCGATC GAAGGTCTTG CGCCGCGCCG CGGACCTGAT GCGCGCAAGA
ACCGAAGAGG CGGCCCGCTG CCTGACCCTG GAACAGGGCA AGCCGCTGGC CCAGGCGCGG
ATCGAATGGG CAAGCTCTGC CGATCTGCTG GACTGGTTCG CGGAAGAGGG TCGCCGCGCC
TATGGCCGCA TCATCGCCGG CCGTGTCCCC AACGCCGATC TGCGGGTTCT GCGCAAGCCG
GTGGGTCCGG TGGCCGCCCT GTCGCCCTGG AACTTTCCCG CCTGGGGCGT GATGCAGAAG
ATCGCGCCTG CGCTGGCCGC GGGCTGTTCG GTCGTGGCGA AGCCGTCCGA GGCCACGCCC
GTCACCACCT GGCACATCGC CATGTGCCTT CTGGAAGCCG GCCTGCCGCC ACGGGCGATC
AGCGTGATCT GGGGCAGCTC GTCGCTGATC TCGGATGCGC TGATCAAGTC GCCCGAGATC
CGCAAGGTCA GCCTGACCGG CTCGACGCGG GTGGGGCGCA TCGTGGCCGC CCTGGCCGGC
GAGCATCTGA AGAAGGTCAC GATGGAGCTG GGCGGCCACG CGCCGGTCAT TGTCGCGGCG
GATGCGGACA TGTCGAAGCT GATCCCGCTT GCCGCGCAGT GGAAGTTCCG CAATGCCGGG
CAGGTCTGTG TCTCGCCGAC CCGCTTCTTG GTCGAGGATG CGGTCTATGA CGATTTCGTC
GATGGTCTGG CGCAAGCCGC CGCGCGGGTG AAGGTCGGCA ACGGGCTGGA CGAAAGCACG
GCCATGGGCC CGCTATGCAC GCGCAACCAG CGCAATGTGA TCTCGGCCAT GGTGGCGGAT
GCGCGGGCCC GGGGGGCGCG TGTCGTGGCC GGGGGTGATG CCATCGGCAA TACCGGCAAT
TTTCACGCGC CCACCGTCGT GGCCGATGCC CATGCCGGGC TGATGGCCAT GAATGACGAG
CCGTTCGGAC CGCTGGCGCT GGTCGCCCGC ATGGGCTCGA TCGACGAGGC GCTGGCCGAG
GCGAACCGGA TGCCGGTCGG GCTGGCTTCT TTCGCCTTCA CCTCGAATGT CCATACGGCC
GCCAGGATCA CGCGGACGAT CCGGGCCGGG ATGCTGGGCA TCAACCACTT CGCCCTGGGC
CTGCCCGAAA CACCCTTCGG CGGGATCCTC GACAGCGGCT TCGGATCGGA AGGCGGGATC
GAGGGACTCG AGGCCTACAC CTCGCCCATG CTCGTCTCGG CCATGGTCTG A
 
Protein sequence
MHTQAGLIIG GESRATGSEG VLEITDPATD EVLASLPKAG LAEVAEATEA ALQSFADWSA 
VSPYDRSKVL RRAADLMRAR TEEAARCLTL EQGKPLAQAR IEWASSADLL DWFAEEGRRA
YGRIIAGRVP NADLRVLRKP VGPVAALSPW NFPAWGVMQK IAPALAAGCS VVAKPSEATP
VTTWHIAMCL LEAGLPPRAI SVIWGSSSLI SDALIKSPEI RKVSLTGSTR VGRIVAALAG
EHLKKVTMEL GGHAPVIVAA DADMSKLIPL AAQWKFRNAG QVCVSPTRFL VEDAVYDDFV
DGLAQAAARV KVGNGLDEST AMGPLCTRNQ RNVISAMVAD ARARGARVVA GGDAIGNTGN
FHAPTVVADA HAGLMAMNDE PFGPLALVAR MGSIDEALAE ANRMPVGLAS FAFTSNVHTA
ARITRTIRAG MLGINHFALG LPETPFGGIL DSGFGSEGGI EGLEAYTSPM LVSAMV