Gene Pden_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0220 
Symbol 
ID4580800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp200561 
End bp201643 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content62% 
IMG OID639767535 
Productluciferase family protein 
Protein accessionYP_914030 
Protein GI119382974 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC TTGGCACCTT CGCGATGCCG CTGCATCCGC CGCATCGCCC GGTCGGCGAC 
ATCATCAAGG AAAACCAGGA CAAGATCATC CTGGCGGACC AGTTGGGCTT CGACATCGCC
TATATGGGCG AACATTATTC ATGCACGACG GAGCAGATCG CCTCGCCGCT GATCTTCTTC
GCCAGCCTGA TCAACCAGAC GAAGAACATC AAGTTCGCCA CCGGCGTCAT CGGCCTGCCG
CAGCATCACC CGGTCATCGT GGCCAATGAG GTGGCGATGT TCGACCACAT GGCGCAAGGC
CGTTTCGTGT TCGGCATCGG GCCGGGCGGC CTGGCGTCGG ATCTCGAGGT GTTCGATCAC
GAAGACCATG CCGTCCGCAA CGAGATGGTC GCCGAACATC TGCGGATCGT TCTGGAAATC
TGGAAATCGG ACCCGCCCTA TGACATCCAG GGCAAATACT GGAACGTCCA GATCAAGAAC
GCGATCTATC CCGAACTGGG CATCGGCTCG ATGAGCAAGC CCTACCAGCT GCCGCATCCG
CCGATCCACA TTTCCTCGAT GTCGCCGGAC AGCCCGACGG TCGCGCTGGC CGCCCGCAAG
GGCTGGGTTC CGATCACCGC GAACTTCACC CCGCACGAGA CCGTCTATGG CCACTGGAAA
CAGTATGTCG CGGGCTGCGA GGCCGTCGGC CGCGAGCCGA CCGGAGAGGA CTGGACCGTC
GCGCGCAACA TCATCATCGG CGAAAGCGAC GCCCAGGCCG AGGACTGGAT GATGGATCCG
CAGGGGTCCA GCCAGTATTA CTACGACTAC ATGTGGAAGG TGCTGGTTGC CGCGGATTAC
ACCACCGTCG CCAAGCCCAG GCCGGACATG AAGGACGAGG ACATCACGGT CGAGCAGATC
ATCCGCTCCT CGGTGATCTG GGGCTCGAAA GAGACCGTGG CCGAGAAGCT GAACGAGCTG
CGCGAGAAGT CGGGGCCGTT CGGCACCCTG CTGATGGCGA TGACCGACGG CAGCGGTCCC
AACCTCGAGC GCGAGCAGCT GTCGATGCAG CGCCTCGCCG AGATCCGCCA CCTGATCCGG
TAG
 
Protein sequence
MVKLGTFAMP LHPPHRPVGD IIKENQDKII LADQLGFDIA YMGEHYSCTT EQIASPLIFF 
ASLINQTKNI KFATGVIGLP QHHPVIVANE VAMFDHMAQG RFVFGIGPGG LASDLEVFDH
EDHAVRNEMV AEHLRIVLEI WKSDPPYDIQ GKYWNVQIKN AIYPELGIGS MSKPYQLPHP
PIHISSMSPD SPTVALAARK GWVPITANFT PHETVYGHWK QYVAGCEAVG REPTGEDWTV
ARNIIIGESD AQAEDWMMDP QGSSQYYYDY MWKVLVAADY TTVAKPRPDM KDEDITVEQI
IRSSVIWGSK ETVAEKLNEL REKSGPFGTL LMAMTDGSGP NLEREQLSMQ RLAEIRHLIR