| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0209 |
|---|
| Symbol | |
|---|
| ID | 4579024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 191454 |
|---|
| End bp | 192362 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639767524 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_914019 |
|---|
| Protein GI | 119382963 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCCGG CAAGCCATCT CTCTGGCGTG CATGCCTTTG TCGAAACGGC CCATCATCTC
AGCTTCACCG GTGCGGCGGA ATCGTTGGGA ATGACGAAAT CCGCCGTCGG CAAAAGCGTC
AGCCGGCTTG AGGCCCGCCT TGGCGTCAAG CTGATCCATC GCAGCACGCG GCGCCTCGTG
CTGACGCAGG ATGGCGAGGC TTATCTGGCC GCCGCCCGCC GCGCATTGGA GGAGATCGAA
GCCGCCGAGG CGTCGCTGTC CAGCAATCAC CGAGAGATCG CGGGCCGGCT TCGGATCGAC
GCGCCGGCCG CCTGGGGGCG CCGGGTCTTG CTGCCGATCC TGACCGAGGT GGCGCTGGCG
CAGCCGGGGC TGAGATTGTC GCTGTCCTTG ACCGACCGGA TCATCGACCC GGTGGCAGAG
CAGGTCGATC TTGTCATCCG CTTCGGCGAA ACGGCCGACA CCGCAGACCT GATCTCTCGC
AAGCTGGCCG AACAGCGCGC GCCGCTGGTC GCTGCGCCCG CATATCTTGC CCGGTGCGGG
GTTCCGGCGC AGCCCGAAGA CCTGCTGCGT CACTGCTGCG TCACCGGGAT CAGCCGCGAG
ATGCCCATCG GCTTTCGCAT CGCGCGCCCC GGCTGCGCGC CGCAGCGCCT TAGGGTGGCA
CCGGCGCACG AGATCGGCGA CGGATCGGCG GTCGTGGAGG CCGCCATCGC GGGGTTGGGA
ATTGCCCAGA TGCCGCTCTC GCTGGTCGCG GACGCGCTGT CGGATGGCCG ATTGGTCGAG
GTGCTGCCCG AATTCGGCAC CGTGCCGGTG GGGATCTTTG CCCTGTGGCC CCGGACGCGG
CACCTGCTGG CGCGCGTGCG GCATGTCGTC GATCTGCTGG CGGCCAAGGG GCAGGCGGGC
GCGCTGTGA
|
|---|
| Protein sequence | MMPASHLSGV HAFVETAHHL SFTGAAESLG MTKSAVGKSV SRLEARLGVK LIHRSTRRLV
LTQDGEAYLA AARRALEEIE AAEASLSSNH REIAGRLRID APAAWGRRVL LPILTEVALA
QPGLRLSLSL TDRIIDPVAE QVDLVIRFGE TADTADLISR KLAEQRAPLV AAPAYLARCG
VPAQPEDLLR HCCVTGISRE MPIGFRIARP GCAPQRLRVA PAHEIGDGSA VVEAAIAGLG
IAQMPLSLVA DALSDGRLVE VLPEFGTVPV GIFALWPRTR HLLARVRHVV DLLAAKGQAG
AL
|
|---|
| |