| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0182 |
|---|
| Symbol | |
|---|
| ID | 4578820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 164730 |
|---|
| End bp | 165875 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639767499 |
|---|
| Product | beta-lactamase-like protein |
|---|
| Protein accession | YP_913994 |
|---|
| Protein GI | 119382938 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.530565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGAAAA GGTGGACCCT TCGGGGCCTG TGCGCTTCGA CGGCGGCCTC GGTGATCTTG
ATGGCCTCGG CCGTCGGGGC CGAACAGGGC AGCGAAACCT CGGACCCGAC CAGCGAGACC
GAACTGGTCA TCCTTGGCGG GGGGGCCGGC AGAACCTCTT ACGGCGGCGA CCCTACCGGG
GGCTTCTCGG CCGCGGTCGT CGTCGGCGAG GACAGATATA TCGTGGATTT CGGAAGAGGC
TGGCAAGAGC GCTATTATGA AGCCGGGCTT GGCAACGAGC GGGCGCATAC GGGGTTCAGC
GGCCTTGAAG GGCTGAAGGC CGGCTTCGTG ACGCATCTTC ATTCCGACCA CATCATCGAC
CTGCCGCGCC TGCTGCTGTT CGGATCCACC GAGGGCCTGC GCAAGCGAAC GGATCCGGTG
GTGATCGTCG GCCCGGCCTC GCGCGGCGAC CTGCCGCCGC TGGCCTCCAA CCTGGAACGG
GAAGAACGGC TTGTCAGCCC GGAAAACCCG ACCCCCGGCA TAAAGTCCAC GGTGGAGCAG
ATCTTTGCGG CATATGCGTC GGATCTGAAC GACAACATCC GCGACAGCGG CATGCCGCAT
CCCGATACCT ATATCGAAGT CCGCGAGATC GCGCTTCCAG AAGGGACCCC CGGACCCGAT
GTCAGTGTCG CCCCCGAGAT GGCACCTTTC GAGATCTATC GGGACGAGAA CATATCGGTT
TCCGCCATCT TGGTGGATCA CGCGCCGATG TATCCGTCCT ATGCCCTGCG ATTTGAAACG
CCGGACGGCG TGATCGTGTT TTCCGGTGAC ACGAACATGA ACCCGAACCT TGTCGAAATT
GCCAGGGATG CCGACATCCT GGTTCTGGAG GTCATCAGCA CGGACTGGGC GAACAACCTG
TTCCCCGAGC CTCGATCCTC TGCCGATATC GCCAAGCTTC ACCACCTGCT GGAATCGCAC
ACCCCCGTCG AGGAGGTCGG CCAGGTTGCC GCCCAGGCGA ATGTCGGCCG CCTGGTCCTG
TCGCACCTGG CGCCTGCAAC CGTCCCCGAC GAAGAGTGGC TGGCCGGCGT AAGCGGTTTC
GAGGGCGAAG TCCTTGTCGG TCGGCCGCTT CTGCGATTGG GCCTGTCGGA AGCGAACAAT
CCCTGA
|
|---|
| Protein sequence | MRKRWTLRGL CASTAASVIL MASAVGAEQG SETSDPTSET ELVILGGGAG RTSYGGDPTG
GFSAAVVVGE DRYIVDFGRG WQERYYEAGL GNERAHTGFS GLEGLKAGFV THLHSDHIID
LPRLLLFGST EGLRKRTDPV VIVGPASRGD LPPLASNLER EERLVSPENP TPGIKSTVEQ
IFAAYASDLN DNIRDSGMPH PDTYIEVREI ALPEGTPGPD VSVAPEMAPF EIYRDENISV
SAILVDHAPM YPSYALRFET PDGVIVFSGD TNMNPNLVEI ARDADILVLE VISTDWANNL
FPEPRSSADI AKLHHLLESH TPVEEVGQVA AQANVGRLVL SHLAPATVPD EEWLAGVSGF
EGEVLVGRPL LRLGLSEANN P
|
|---|
| |