| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0172 |
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| Symbol | |
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| ID | 4579725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 153619 |
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| End bp | 155283 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767489 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_913984 |
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| Protein GI | 119382928 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTC TGGAAAGCAC CCGCACCGCC ACCACCGACA TCGAGGACCG CGTGCCCCTC
GACGCGCTCG GCAGCCGCGA GATCGGCTTC GCCATTCCCG AAACCTATAA TGCCAGCGCG
ATCCTGTTCG ACAATCTCGA CCGCGGGCGC GGCGGCCATA TGGCGGTGAT CGGGCCGGGC
GGCAGCCGGA CCTATGCCCA GCTTTGCGCC GAGGCCAGCC GCTTCGGCAA TGCGCTGCTG
GGGGCGGGCC TGACGCAGGG CGACCGTATC CTGTTGTTTC TGGATGACAG CCCCGCCTAT
CCCGCCGCGC TGTTCGGCGC GATCCGCGCG GGGCTGGTGC CCTTGCTCAT CAACACGCTG
ACGCCGCCGG AGCTTTTGAA CTTCTACCTC AAGGATTCGT CCTCGCGGGT GGCCATCGCG
GATGCCGCAT TCGCCGCGCG CTTCGACGAC GTGGCCTGCG CCGAGACCGC GCTGGAGCGT
CTGGTCGTCG TCAACGGCGC CGCGCCCGAG GACAGCCCCG TGCCCGTCCA GACGGCCGAG
GCGTTCCTGC AAGGCGTCTC GGACAGCCTG GCCCCGGCGC CGACCGGGCG CAACGACATG
GCCTTCTGGC AATATTCGTC CGGCTCGACC GGGCGGCCCA AGGGGATCGT GCATCTTCAG
CATGACATGG CCTATACGGC GCTGTCCTTC GGGCGGCATG TGCTGGACCT GCAACCGGGC
GATATCTGCT TTTCGGTGCC CAAGATCTTC TTCGCCTATG GGCTGGGCAA TTCGCTGACC
TTCCCCTTCT CGGTCGGCGC GACCAGCGTG CTGCTGCCGG GCCAGCCCAG GCCGGCGGCG
GTGTTCGAGG CGATCGCCAC CTGCCGGCCC ACGCATTTCT TCGGCCTGCC CACGCTTTAC
ACCGCGATGA CCAGCGCCCC CGAGGCCGCG ACCGCCGATC TGTCCAGCCT GAAGCTGTGC
CTGTCGGCGG CCGAGGTCCT GGCCAACGAG GTGGCCGAGG CGTGGCGGGC GCTGTCGGGC
CATGACATCA TCGAGGGACT CGGCTCGACC GAGGTGCTGC ATATCTACCT GTCCAACACC
CGCGAGGCGC GCCGGCCGGG CGCGGCGGGG CTGCGGGTGC CGGGCTACGA GGTCGCGATC
CGCGATCCCG ACGGCAACGA CGTGCCCGAC GGGGAACAGG GCGTCTTGTG GGTGCGCGGC
GATTCCAACG CGCCCTTCTA CTGGAACCGG CCCGACAAGA CCGCCGATGC GATGCGCGGC
GATGGCTGGA TCTATACCGG CGACCGGATG CGCCGCGATG CCGATGGCTT CTACTATTTC
CTTGGCCGCG CGGATGAATT CGTCAAGGTC TCGGGCCAGT GGGTCTATCC GCTGGAGGTC
GAGCTGTGCC TGGCCGACCA CCCCGAGCTG CGCGAATGCG CGGTGCTGGC GGTGGAAATG
GCCGACCGGC GCATGACGCT GCACGCCTTC GTCACCGCCG AGGATCCGGG CGCCGACCGC
GCCGCGCTGG CCGACCGGCT GAAGCGCCAC GTCAAGGCGA CGCTGCTGCC CTACAAATAC
CCTCGCAGCG TGATCTTCCT GGATCATCTG CCCAAGACCG GCACCGGCAA GATCGACCGG
CAGGCGCTGC TGGCGATCGA CCTGGACGAC CACGACGTGT TCTGA
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| Protein sequence | MTVLESTRTA TTDIEDRVPL DALGSREIGF AIPETYNASA ILFDNLDRGR GGHMAVIGPG
GSRTYAQLCA EASRFGNALL GAGLTQGDRI LLFLDDSPAY PAALFGAIRA GLVPLLINTL
TPPELLNFYL KDSSSRVAIA DAAFAARFDD VACAETALER LVVVNGAAPE DSPVPVQTAE
AFLQGVSDSL APAPTGRNDM AFWQYSSGST GRPKGIVHLQ HDMAYTALSF GRHVLDLQPG
DICFSVPKIF FAYGLGNSLT FPFSVGATSV LLPGQPRPAA VFEAIATCRP THFFGLPTLY
TAMTSAPEAA TADLSSLKLC LSAAEVLANE VAEAWRALSG HDIIEGLGST EVLHIYLSNT
REARRPGAAG LRVPGYEVAI RDPDGNDVPD GEQGVLWVRG DSNAPFYWNR PDKTADAMRG
DGWIYTGDRM RRDADGFYYF LGRADEFVKV SGQWVYPLEV ELCLADHPEL RECAVLAVEM
ADRRMTLHAF VTAEDPGADR AALADRLKRH VKATLLPYKY PRSVIFLDHL PKTGTGKIDR
QALLAIDLDD HDVF
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