| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0150 |
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| Symbol | |
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| ID | 4580174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 133466 |
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| End bp | 134785 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767468 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_913963 |
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| Protein GI | 119382907 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGAT CCGGCGTCAT CGACAATTTC CTGGCGGTCT TCACCAGCTA TATCGACAGC
GGCTTCGGTC TTCTGGGCGG CGAGGTCGCC TTCATCGCCA CCACGCTGAT CGTCATCGAC
GTGACGCTGG CCGCCCTGTT CTGGGCCTGG GGCGCCGAGG ACGATATTCT GGCCCGGCTG
GTGAAGAAGA CCATCTTCGT CGGCGTCTTC GCCTGGCTGA TCACCAACTG GAACAGTCTC
GCGCGCATCG TCTTCGACAG TTTCGCCGGT CTCGGGCTCA TGGCCTCCGG CACCGGCTTC
ACCGCCGCCG ATCTCATGCG CCCCGGCCGC GTCGCCCAGA CCGGGCTCGA TGCCGGACGG
CCGCTCCTGG AATCCATCTC CGACCTGATG GGCTGGGTCG CGGTGTTCGA GAACCTGATC
CAGATCCTCT GCCTGTTCTT CGCCTGGGCG CTGGTGATCC TCGCCTTCTT CATCCTCGCC
GTGCAGCTCT TCGTCACCCT GATCGAGTTC AAGCTGACCA CGCTCGCGGG CTTCGTGCTG
ATCCCCTTCG GGCTTTTCGG CAAGACCGCC TTCATGGCCG AGCGCGTGCT GGGCAATGTC
GTCTCCAGCG GTATCAAGGT TCTCGTGCTA GCCGTCATCA TCGGCATCGG CAGCACCTTG
TTTTCGCAGT TCACCACCGG CTTTGGAGGC GTCGCGCCCA CCGTGGACGA CGCCATGGCC
ATCGTGCTGG CGGCGCTGTC GCTCTTGGGC CTCGGCATCT TCGGCCCCGG CATCGCCAAC
GGGCTCGTCT CCGGAGGTCC GCAGCTTGGC GCGGGTGCCG CCGTCGGCAC CGGGCTGGCC
GTAGGGGGTG CCGCGCTCGT CGCCGGTGGG GCGACCGTGC TGGGGGCGAA GGGTGGTGCG
ATGGCCGCAC GCGGCGGAGC CGCGACGGCG GGCGCCGCCT CCGCTGCCTA CACCCTCCAT
TCCGCCGGAG AATCCGGGCT CGGTGGTGCC CTCTCCGGTG TCGCCGGTAT CGGCAAAGGT
GCCGGCATCG CCGCGCTGTC GCCGCTGCGC AAAGCGGCGG CCAGCATCTC CAAGAGCCAT
GCCGCCGGAG TGAAGACCGC CTTCACCGGC ACTGGCGGAT CCACCACGCA GGGAACGCTC
GGCGGCGTCG GTGCATCTGT GCCCACTCCG TCATCTCCCG GCAGCCCGCC CGCCTGGGCG
CAGCGCCTGC GCGGGCAAGC CGTGGGCCGG GGCGCAACCG TCGCCGCCCA TGCGGTCCGG
TCAGGTGACA GCCATGGTCC CGGTGCTTCC GTTTCCCTTT CCGAAAGCGA CAAGCCATGA
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| Protein sequence | MGGSGVIDNF LAVFTSYIDS GFGLLGGEVA FIATTLIVID VTLAALFWAW GAEDDILARL
VKKTIFVGVF AWLITNWNSL ARIVFDSFAG LGLMASGTGF TAADLMRPGR VAQTGLDAGR
PLLESISDLM GWVAVFENLI QILCLFFAWA LVILAFFILA VQLFVTLIEF KLTTLAGFVL
IPFGLFGKTA FMAERVLGNV VSSGIKVLVL AVIIGIGSTL FSQFTTGFGG VAPTVDDAMA
IVLAALSLLG LGIFGPGIAN GLVSGGPQLG AGAAVGTGLA VGGAALVAGG ATVLGAKGGA
MAARGGAATA GAASAAYTLH SAGESGLGGA LSGVAGIGKG AGIAALSPLR KAAASISKSH
AAGVKTAFTG TGGSTTQGTL GGVGASVPTP SSPGSPPAWA QRLRGQAVGR GATVAAHAVR
SGDSHGPGAS VSLSESDKP
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