| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0142 |
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| Symbol | |
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| ID | 4580166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 127107 |
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| End bp | 129131 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639767460 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_913955 |
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| Protein GI | 119382899 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCGGCA CGAAGATCCT CTGGGGCCAG ATCACCGTGG TCTTCCTGAT CGTGCTGATC
TTCGTCTGGT CCGGCACGCA ATGGACGGCC TGGCGGCTTG GCTTCCAGCC GCAGCTCGGC
CCGGCCTGGT TCGCTCTCTG GGGCATTCCG GTCTATTACC CGCCGGCCCT GTTCTGGTGG
TGGTACTTCT ACGATGCCTA TGCGCCACGC ATCTTCGTCG AGGGCGGCAT CATCGCTGCC
GCGGGCGGAT TCCTCGCCAT CGGCACCGCC ATCATCCTCT CGGTGATGCG CGCCCGTGAG
GCTGCCGATG TCGAGACCTA CGGCTCGGCG CGCTGGGCGG AGCGGCCCGA GATCGAGCGG
GCCGGACTGC TCGGCCCCGA TGGCGTGGTG CTCGGCAAGC TCGGCGCGGA CTATCTGCGC
CACGACGGCC CGGAACATGT GCTCTGCTTC GCACCGACCC GATCCGGTAA AGGCGTCGGG
CTGGTGGTGC CGACGCTGCT GACCTGGCCC GGCTCGGCCA TCGTCCATGA CATCAAGGGT
GAGAACTGGC AGCTCACCGC CGGGTTCAGG GCACGGCACG GCCGGGTGCT GCTCTTCGAT
CCGACCAATG CCCAATCCGC CGCCTACAAC CCGTTGCTGG AGGTGCGCCG CGGGGAATGG
GAGGTGCGCG ATGTCCAGAA CATCGCCGAT ATCCTCGTTG ATCCCGAGGG CTCGCTGGAA
AAGCGCAACC ATTGGGAAAA GACCAGCCAT GCCCTTTTGG TTGGCGTGAT CCTGCATGTG
CTCTATGCCG AGGAGGATAA GACCCTCGCG CGCGTCGCCG CCTTCCTCTC CGATCCGCGC
CGGTCGATCG AGGCGACGCT GGCGGCGATG ATGAAGACCC CGCATCTCGG AGAGGCCGGC
CCGCATCCGG TCATCGCCAG CGCCGCGCGC GAGTTGCTGA ACAAGGCCGA GAACGAACGC
TCGGGCGTGT TGTCCACCGC CATGTCCTTC CTCGGGCTTT ACCGCGATCC GGTGGTGGCC
CAAGTCACCA GCCGCTGCGA CTGGCGCATC GCCGATCTGA TCGCGGGCGA GCAGCCTTCG
ACGCTTTATC TGGTGGTGCC GCCTTCCGAC ATCTCGCGCA CCAAGCCGCT GATCCGGCTG
GTGCTGAACC AGATCGGCCG GCGCCTGACC GAGGATCTGC GCGGCAAGGA CGACCGGCAC
CGCCTGCTGC TGATGCTGGA CGAGTTCCCG GCGCTGGGAC GACTGGATTT CTTCGAATCC
GCCCTGGCCT TCATGGCCGG CTACGGCATC AAGTCCTTCC TGATCGCGCA ATCGCTCAAC
CAGATCGAGA AGGCCTATGG CCCGAACAAT TCGATCCTCG ACAACTGCCA TGTCCGGGTC
AGCTTCGCCG CCAACGACGA GAGGACGGCC AAACGGGTCT CCGATGCCCT CGGCACCGCC
ACCGAGATGA AGGCGATGAA GAACTATGCC GGGCACCGCC TGGCGCCCTG GCTCGGCCAT
ATCATGGTCT CGCGCTCCGA GACCGCCCGG CCGCTGCTCA CCCCCGGCGA GGTGATGCAG
CTGCCGCCCG AGGACGAGAT CGTCATGGTG GCGGGCACCC CGCCGATCCG GGCCCGGAAG
GCGCGCTACT ATGTCGATCC GCGTTTCCGC GAGCGGGTGC TGGCCCCGCC CGATACGCGC
GAGGTCATGC CTTCACGGCA GATGGATGAC TGGACCGGGC TGCCGCCGCC AAAGCTGGAT
GATGTGGGGC AGGGGGCTGG TGCTGCCGCC GTGCCGAATG CCGCGCTTGC CCAGGTCGAC
ACCAATTCAT CCGGGGATTC GGACAATGCC GGTCTGCGCC GAGAGCCAGG ACTGGAGCCC
TATCAGGATA TCGCGCCGCA GCCGGTGACG CTTCCGGAGA ACGAGTTCGA TCCCGATTTC
GAGGCCCCCG AGCAGCAGGC GGTCCGTAAC CGGGGACTGG CGCGCGACAT GCGTCGGGTC
GCGCGCCAGA TCTCGATGAA CCAGGACGAC GGATTGGAGC TCTGA
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| Protein sequence | MSGTKILWGQ ITVVFLIVLI FVWSGTQWTA WRLGFQPQLG PAWFALWGIP VYYPPALFWW
WYFYDAYAPR IFVEGGIIAA AGGFLAIGTA IILSVMRARE AADVETYGSA RWAERPEIER
AGLLGPDGVV LGKLGADYLR HDGPEHVLCF APTRSGKGVG LVVPTLLTWP GSAIVHDIKG
ENWQLTAGFR ARHGRVLLFD PTNAQSAAYN PLLEVRRGEW EVRDVQNIAD ILVDPEGSLE
KRNHWEKTSH ALLVGVILHV LYAEEDKTLA RVAAFLSDPR RSIEATLAAM MKTPHLGEAG
PHPVIASAAR ELLNKAENER SGVLSTAMSF LGLYRDPVVA QVTSRCDWRI ADLIAGEQPS
TLYLVVPPSD ISRTKPLIRL VLNQIGRRLT EDLRGKDDRH RLLLMLDEFP ALGRLDFFES
ALAFMAGYGI KSFLIAQSLN QIEKAYGPNN SILDNCHVRV SFAANDERTA KRVSDALGTA
TEMKAMKNYA GHRLAPWLGH IMVSRSETAR PLLTPGEVMQ LPPEDEIVMV AGTPPIRARK
ARYYVDPRFR ERVLAPPDTR EVMPSRQMDD WTGLPPPKLD DVGQGAGAAA VPNAALAQVD
TNSSGDSDNA GLRREPGLEP YQDIAPQPVT LPENEFDPDF EAPEQQAVRN RGLARDMRRV
ARQISMNQDD GLEL
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