| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0136 |
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| Symbol | |
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| ID | 4579515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 121919 |
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| End bp | 122851 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639767454 |
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| Product | hypothetical protein |
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| Protein accession | YP_913949 |
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| Protein GI | 119382893 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF
[COG5489] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.182837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.710714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCA GGACCCGCAC CGCCTATCTC GCTGCCACCG GCCTTGCCGT TCTGGTGATC
GGTGCTGTTT CCGTCACCGA GATCGCGCCC CGACTGATCT GGAACGCCTC CGCCAGCGTG
CCGCTCGGGC TTTATGCCGT TCAGCCCGTC GGCAATCTGA CCCTCGGCGA TCTGGTCGCG
GTGACGCTGC CAGAACCGCT GGCGCAGTTC ATCGTTGCGC GCGGCTATGT CGGCCCCGGC
GTGCCGCTGC TGAAGCGCGT CGCCGCGCTT CCCGGCACCC GGGTCTGCCG CAGAGGATCC
ACGATCACCG GCGACGGCCA GGTCCTCGGC GAGGCGCGCG AACGTGACCG CTTCGGCCGG
CCGCTGCCAA CCTGGCAGGG CTGCCGGCTG ATCGCTGAAG GCGAGGTGTT TCTCATGAAC
CAGGACGCGG AAGACAGTCT CGACGGCCGC TATTTCGGCC CGCTCCCGCT CGGCAGCGTC
ACCGCTCGCA TCGTCCCGCT TTGGACCGAT GCGGAGGACC ACGGCCGCTT CCGCCGGCCT
GCGGCCGGTG CGGAAACGGT CCCTGATCCC ACCACCAACC ACCAGCCCAC GGAGAGTAAC
ATGCCACAGA TCGGCGAATT CACCCGCACA CAATCCGGAT ACGAGGGCCG CATCCGCACC
GTCACGCTCG ATCTGCAACT GGTCTTCGTG CCCACCCATG CCGATGTCGA GAACGCCCCG
GATTACCGGC TCCATCTCGA CGGCGAGGAC GGACCGGAGA TCGGCGCCGG CTGGACCCAT
AGTGGCGAAA GGGCCGGAAC CTACATCTCG GTCGCCCTCG ACGATCCCGT CCTCGCGCAG
CCGATCCGCG CCCGGCTGTT CCAGTCCGAC GAGCAGGGCC GAAACTGGGG CCTGCACTGG
TCGCGTCCCA GAAAACGCGA CGAGCGGGAC TGA
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| Protein sequence | MTRRTRTAYL AATGLAVLVI GAVSVTEIAP RLIWNASASV PLGLYAVQPV GNLTLGDLVA
VTLPEPLAQF IVARGYVGPG VPLLKRVAAL PGTRVCRRGS TITGDGQVLG EARERDRFGR
PLPTWQGCRL IAEGEVFLMN QDAEDSLDGR YFGPLPLGSV TARIVPLWTD AEDHGRFRRP
AAGAETVPDP TTNHQPTESN MPQIGEFTRT QSGYEGRIRT VTLDLQLVFV PTHADVENAP
DYRLHLDGED GPEIGAGWTH SGERAGTYIS VALDDPVLAQ PIRARLFQSD EQGRNWGLHW
SRPRKRDERD
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