| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_0134 |
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| Symbol | |
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| ID | 4579513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 119003 |
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| End bp | 120622 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639767452 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_913947 |
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| Protein GI | 119382891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3547] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.191643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.811146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGC CGCGTGCGTC TCTTTCCCTG CCGCTGCATG TGCTCGATCT GTTCAGCGGT
GCCGCCGGCG GCTGGTCTCT CGGCCTGCAC CGGGCGGGGT TCATGACCAT CGCCGCCTGC
GAGATCGTGG AATGGCGCCG CATCCTCTAT TCGGAGAATT TTCCGCATGT CAGACTCTAC
GCCGATATCC GCGACCTCAC GGCAACTCGA CTTGTTTCCG ACCTCGGCTG CCTGCCCGAC
ATCGTCGTCG GCTCGCCGCC CTGCCAGGAC ATCAGCAGCG CCAACACGAA GGGGAAGGGG
ATCGAGGGCG AACGCTCGGG CCTCTACCTC GAGGCCGTGC GCCTGGTCGG AGAGTGCCGC
CCTCGCTGGT TCGCTTTTGA GAACAGATCC TATGGCTGTT TGCCGGAGGC CGCTGTCGTG
CGGTTATGGG CAAGGCAAAT GGTCAAGGAG GCAGCCATGA ATACGCAGGT TCATCAACAT
AAATCGCACG TCATCGCTCA TGACGAGGTT TCAGCGATAT TCATATCCTT GGAATTAAGC
AAATCGACCT GGCTGGTGAC GTCGATTTCT CCGGGCGCGG GGGAAAAAAT GTCCCGGCAT
ACCGTTAAGG GCGGCGATGT GGCGGCCCTG ATGGACCGAT TTGATGCGCT TCGTCATAAA
GCCCTGCAAA GAACCGGCCG TGACTTTCCG ATTGTGACAA TCCATGAGGC CGGCCTGGAC
GGGTTCTGGA TACATCGTAT CCTCGAACGG GAAGGCGTCG AAAGCCACAT TGTCGATGCG
GCGTCGATTG CAGTGCCGCG GCGGCATCGG CGTGTGAAAA CCGACAAGGT CGATGGCGAA
ACCCTCGTCA GGACGTTGCT GGCCTGGAAA CGGGGGGAGC CGCGGGTCTG TTCGATGGTC
CGCGTGCCCT CTCCGGAGGA TGAGGACAGG CGCCGACCGT CGCGGGAGCG CAAGGTTCTG
ATCGCGGAAC GTGTCAGCCA CGTCAACCGC ATCAAGGGGC TGCTTTATTC GCAAGGCGTG
GCCTATGAAC CCCTGCATCG CAATCGCCGG CAGAATCTGG AAGAGCTGCG CACTGGCGAC
GGGCGCCCGC TTTCGCCCTG CCTGAAACGA CAGATCCTGC GCGAACTCGA TCGCCTCGAA
CTGCTTCTGG AGCAGATCAG GAACGTCGAG GCAGAGCGCG ACGCCGACCT GAAAGAGGAA
CGTAAAACCG ATACGCCGCC GGTTGGGGTT CTGGCCGCGC TGAAAGGTAT CGGCCCTGAG
TTCGCGGCCG TGATCTGGGC CGAGGGGCTG TCACGCCCGT TTGAGAACCG ACGGCAAGTG
GCAGCCTACG CGGGCCTGGC ACCGACACCA TGGCAAAGCG GTTCCGTGAA CCGGGAGCAG
GGTGTCAGCA AATCCGGCAA TCCCAGGCTG CGAACGACCA TGATCCAGCT TGCCTGGCTC
TGGCTGCGTC ATCAGCCTCG TTCCGAGCTG AGCTGCTGGT TCCAGCAGCG CGTGGCCGGC
CATGGCGGTC GTGTCCGCAA GACCATGATC GCCGCCATGG CGAGAAAACT GCTTGTCGCC
CTGTGGAAGT ACCTCACGGC CGGCGTCGTC ATCGAAGGTG CCGCCATGAA GACGGTTTGA
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| Protein sequence | MTMPRASLSL PLHVLDLFSG AAGGWSLGLH RAGFMTIAAC EIVEWRRILY SENFPHVRLY
ADIRDLTATR LVSDLGCLPD IVVGSPPCQD ISSANTKGKG IEGERSGLYL EAVRLVGECR
PRWFAFENRS YGCLPEAAVV RLWARQMVKE AAMNTQVHQH KSHVIAHDEV SAIFISLELS
KSTWLVTSIS PGAGEKMSRH TVKGGDVAAL MDRFDALRHK ALQRTGRDFP IVTIHEAGLD
GFWIHRILER EGVESHIVDA ASIAVPRRHR RVKTDKVDGE TLVRTLLAWK RGEPRVCSMV
RVPSPEDEDR RRPSRERKVL IAERVSHVNR IKGLLYSQGV AYEPLHRNRR QNLEELRTGD
GRPLSPCLKR QILRELDRLE LLLEQIRNVE AERDADLKEE RKTDTPPVGV LAALKGIGPE
FAAVIWAEGL SRPFENRRQV AAYAGLAPTP WQSGSVNREQ GVSKSGNPRL RTTMIQLAWL
WLRHQPRSEL SCWFQQRVAG HGGRVRKTMI AAMARKLLVA LWKYLTAGVV IEGAAMKTV
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