Gene Pden_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0123 
Symbol 
ID4579502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp113488 
End bp113898 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID639767441 
Productsingle-strand binding protein 
Protein accessionYP_913936 
Protein GI119382880 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.46256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.222471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACA TCGTCATCCT CGCCGGCACC ATCCGCCAGG CCCCCGAAAC CCGCACCACC 
CGCAGCGGCA CCGACGTCAC CCGCTTCAAG CTGGTCACCT CGCGCCCGCT CTACTCGGAG
GGCCGAGTCG TCCGCGACGA GACCGGTTAT CGGGTCGAGG ACGCGGAATG GCACCGCGTC
GTCGCCTTCA ACGGGTTGGG CCGGACCATC CAGCAATATT GCGAATCCGG CACGAAGGTG
CTGGTGCGCG GCCGCATCCA CTACACGAAA TGGCAGGATG CGGAAGGTCA GGACCGCTAC
GGCTGCGAGA TCGTCGCCGA GACGGTGGAT TTCCTCAGCC GGGCACTGCA GTCAGAGGCC
GACGACAAGG ACGAGGGCCG GTTCATCGAT GAAGACGACA TCCCCTCCTG A
 
Protein sequence
MQNIVILAGT IRQAPETRTT RSGTDVTRFK LVTSRPLYSE GRVVRDETGY RVEDAEWHRV 
VAFNGLGRTI QQYCESGTKV LVRGRIHYTK WQDAEGQDRY GCEIVAETVD FLSRALQSEA
DDKDEGRFID EDDIPS