Gene Pden_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_0108 
Symbol 
ID4580886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp100054 
End bp101091 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content66% 
IMG OID639767426 
Productaldo/keto reductase 
Protein accessionYP_913921 
Protein GI119382865 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0196191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00894917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCTACC GCACTCTCGG CCCCAGCGGC CTCTTGGTTT CCGAACTCTG CCTCGGCACC 
ATGACCTTCG GCGGCTCGGA GGGCATGTGG GGCCAGATCG GCAAGCTGCG TCAGGACGAA
GCCGACAGCC TGGTCAGGGC GGCCTTCGAT GCCGGCATCA ATTTCATCGA CACCGCCAAT
GTCTATGCGG GCGGCGAGAG CGAGCGGATC CTCGGTCAGA CCATCCGTAA CCTCGGCATT
CCGCGCGACG AGGTGGTGAT CGCGACCAAG GTTCTTGGGG TGATGGGCGA GGGCCCGAAC
GCCCGCGGCG CCTCGCGCGG CCATATCATG GCGCAGGCCA AGGCCAGCCT GCAACGGTTG
CAGATGGATC ACATCGACCT CTACCAGATC CACGGCTTCG ATCCGCTGAC CCCGATCACC
GAGACGCTGG AGGCGCTTGA CACGCTCGTG CGGCAGGGCC ATCTGCGCTA TGTCGGGTTG
TCGAACTGGG CGGCCTGGCA GATCGTCAAG GCGGTCGGCA TCGCTGAGGC GAGCAAGCTG
GCGCCGATCC TGTCGCTTCA GGCCTATTAC ACGCTGGTCG GCCGCGATCT CGAACGCGAG
ATCGTGCCGA TGCTGCAAGC CGAGGGCCTC GGCCTGATGG TCTGGAGCCC GCTGGCCGGC
GGCTTCCTCT CGGGCAAATA CAGCGACGGC AACACCGCGA ATGACGGCCG CCGGGCGAGT
TTCGACTTCC CGCCGGTCGA CCTGGAGCGC GGCGATGCCG CCATCGCCGT GATGCGCGAG
ATCGCATCGG CCAGGGGTTG CACGGTGGCG CAGGTGGCGC TGGCCTGGCT GCTGCACCAG
CCAGTAGTGA CCAGCGTGAT CGTCGGGGCG AAGCGGATCG AGCAGCTGCA GGACAATATC
CGCTCGACGG AGGTGGCGCT GACGGCTGAG GACCTGGCCG CGCTTGATAC GGTGACGAGG
CTGCCGGCCG AATATCCGGG CTGGATGCTG GAACGCCAGT CGCAATATCG CGCGACTTTC
GCCTCGCAGA AGGGCTGA
 
Protein sequence
MRYRTLGPSG LLVSELCLGT MTFGGSEGMW GQIGKLRQDE ADSLVRAAFD AGINFIDTAN 
VYAGGESERI LGQTIRNLGI PRDEVVIATK VLGVMGEGPN ARGASRGHIM AQAKASLQRL
QMDHIDLYQI HGFDPLTPIT ETLEALDTLV RQGHLRYVGL SNWAAWQIVK AVGIAEASKL
APILSLQAYY TLVGRDLERE IVPMLQAEGL GLMVWSPLAG GFLSGKYSDG NTANDGRRAS
FDFPPVDLER GDAAIAVMRE IASARGCTVA QVALAWLLHQ PVVTSVIVGA KRIEQLQDNI
RSTEVALTAE DLAALDTVTR LPAEYPGWML ERQSQYRATF ASQKG