Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_0052 |
Symbol | |
ID | 4579083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 44505 |
End bp | 45785 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639767363 |
Product | Fis family transcriptional regulator |
Protein accession | YP_913865 |
Protein GI | 119382809 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGA AACTCGCAAC TGTTGCACTG GGTGCCGTCA TGGCGGCGGC GCCGGCCATG GCCGACCTGG TGGTGCCCAA TCTCAGCTAT CGCACCGGGC CCTATGGCGC GAACGGCACG CAATATGCCG ACGGGTTCAA CGATTACTTC ACCCTGCTGA ACGAGCGCGA CGGCGGCATT GGTGGCGAAA AGATCCGGAC CCCGGAATGC GAGACCGCCT ATAACACCGA GAAGGGCGTC GAGTGCTACG AGGCGACCAA GGGCTCGGGC GCGCTGGTCT ACAACCCGCT CTCGACCGGC ATCACCTATC AGCTGATCCC CAAGGTGGCG GCGGACAAGA TCCCGCTTTA CACGCCGGGC TATGGCCGGA CCTCGGCCAA GAACGGCAAG GTCTTCGAAT GGGTGTTCAA CGCGCCGGCG AACTACTGGG ACGGTGCCAG CGTGGCGATC AAGTATCTGC TGGACCAGAA CGGCGGCAGC CTTGAAGGCA AGAAGATCGC GCTGGTCTAT CACAACTCGG CCTATGGCAA GGAGCCGATC CGCACCCTTC AGGAGCTTGG CAAGAAGCAC GGCTTCACCC TGACCGAACT GCCGGTCGAT CCGCCGGGCC AGGAACAGAA GAGCCAGTGG CTGCAGATCC GCCGCGACAA GCCGGATTAC GTGCTGATGT GGGGCTGGGG CGTGATGAAC CAGACCGCCA TCCAGGAAGC CGCCAACATC CGCTTCCCGA TGGAGAACTT CATCGGCACC TATTGGTCGG GCTCGGAAGT GGACGTGAAG CCGGTAGGCG CGGGCGCCAA CGGCTACAAG GCGCTGACCT TCCACGGCGT CGGCATGGAT TATCCGATCT ATGAGGACAT GAAGAAGCAC GTCATCGATC CGGGCAAGGC TTCGCAGGGC GGGCAGTTCG TCGGCTCGGT GCTTTACTCG CGCGGCATGT ATGCCGGGGT GGTGATCGCC GAGGCGATCA AGAAGGCGCA GGAACTGGCC GGCACGTCGC AGATCACCGC GGCGCAGTTG CGCGACGGGT TCGAGGCGCT GGACATCACG CCGGAGCGTC TGGCCGAGCT GGGGCTGCCG GACTTCGGTC CCGAGATCAA GATGTCCTGC GACAACCATG GTGGCAGCGG CATGGCGCGG CTTCAGCAAT GGGACGCCTC GGCCGGGAAA TGGACCCTGA TCACCGACTT TACCCAACCC GATCAGGACG TGCTGGACCC GCTGATCCTT GAGGACAGCG AGGCTTATGC CAAGGAAGCC GGCATCTCGC CGCGCTGCTG A
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Protein sequence | MKLKLATVAL GAVMAAAPAM ADLVVPNLSY RTGPYGANGT QYADGFNDYF TLLNERDGGI GGEKIRTPEC ETAYNTEKGV ECYEATKGSG ALVYNPLSTG ITYQLIPKVA ADKIPLYTPG YGRTSAKNGK VFEWVFNAPA NYWDGASVAI KYLLDQNGGS LEGKKIALVY HNSAYGKEPI RTLQELGKKH GFTLTELPVD PPGQEQKSQW LQIRRDKPDY VLMWGWGVMN QTAIQEAANI RFPMENFIGT YWSGSEVDVK PVGAGANGYK ALTFHGVGMD YPIYEDMKKH VIDPGKASQG GQFVGSVLYS RGMYAGVVIA EAIKKAQELA GTSQITAAQL RDGFEALDIT PERLAELGLP DFGPEIKMSC DNHGGSGMAR LQQWDASAGK WTLITDFTQP DQDVLDPLIL EDSEAYAKEA GISPRC
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