Gene Cpha266_2669 details

Gene Information

• Locus tag: Cpha266_2669
• ID: 4568773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 3062609
• End bp: 3063178
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 639767235
• Product: TPR repeat-containing protein
• Protein accession: YP_913077
• Protein GI: 119358433

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00543716
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGGT TATTCTCTCT TGCGGCATGC GTTCATATTA TCCTGTTTTT GCTTGTCGCG 
ACGGCCTTTG CGGACGGTTC GAATGCCGCG TTCAACATCG GATATGAAAG CCACCTCAGA 
GGCGATCTGA AAGGTGCCAT CAAGCACTAC ACTTCGGCTA TCGAGAAGAA TCCCGTTTTT 
GCCATGGCCT ATCAGATGCG CGCTGCGGCA TGGCAGCAGA TGAAACGATA TGATCTGGCC 
ATTAACGACT TTTCGATGGT CATCTCTTTT GGCGAACCCT ATTTTCAATC CGTAGGGTAC 
TTTAATCGCG GCGTGGCTAA AAACATGGCC GGCGATTACT ATGGCGCCAT TCCTGATTTC 
AACCAGACCA TTACGCTCGA TAAAAGAATG TCGGCGGCCT ATTTTCATCG GGGTATCGCT 
AAAAAGAAAA CCGGCGATAC CTTCGGTCAA CTGCAGGACT TTCGCGAAGC CGCCCGTCTT 
GGAGAGCCCA ATGCTGAAAA ATGGCTGAAC GCCAACTATC CCGGCTGGAA AGAGATGGCG 
TCTGGCATCA CCCCTCTCTT CACCCCTTAA 

 

Protein sequence

MKRLFSLAAC VHIILFLLVA TAFADGSNAA FNIGYESHLR GDLKGAIKHY TSAIEKNPVF 
AMAYQMRAAA WQQMKRYDLA INDFSMVISF GEPYFQSVGY FNRGVAKNMA GDYYGAIPDF 
NQTITLDKRM SAAYFHRGIA KKKTGDTFGQ LQDFREAARL GEPNAEKWLN ANYPGWKEMA 
SGITPLFTP