Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2310 |
Symbol | |
ID | 4570948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 2644105 |
End bp | 2646552 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639766871 |
Product | TonB-dependent receptor |
Protein accession | YP_912725 |
Protein GI | 119358081 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTTTTA CGCTAACCCT GGGTGATTCT TATTTTCCGA AATTGGCTTA TTCTTGTTTT CCGATCACAG TAGTTGGCGC ATCGGTAGTT ATTGCCGGGA CAACTCTCGG TACAGCTACC GACATGAACG GCAACTTCGT GCTCAAAGGA GTCCCGGCAA AACAACAGCG AGTCTCCGTC TCGATTGTCG GTTACGCACC TTCAAGCCAG GTTGTCACCG TCGGCGCAGG TCAAACCGCA GTAGCGAACT TCTCGCTCGG CCAAACCACC GTTATGGCAT CGGAAGTAGT TGTCGGCGCG GCGCTTTACA AGCAGGACAG GCTTGAAGTT CCGGTGACTG CCAACGTGGT TTCTGCCGAA AAAATCAAAC AGGAACCTAA CCCGACCCTC GATCAGGTCG TTGAGGACGT CCCTGGCGTT GTTGTCACCC GCGCCGGAGG ACAAACAACC TCAACCCTGC AGATCCGCGG CTCCAATACT TATCAGGGCG GTGCAATCGG CACCCGAGTG CAGGGTTTCT ATGATGGATT CCCGCTCAAC AGCCCTGAAA CCGGTGAAGT TGTCTGGTCT TCGGTCAACA TGAACGCAGC CGACAAGGTC GAGGTGCTCA AAGGTTCAGC AGCAACCCTC TACGGTTCGG GCGCCATGGG CGGTGTGGTT AACGTGTTCG GCCACCTTCC GGAAACCCTT GAAGTGAAAG CCGGAACAAG CGCAGGCTTT TACGATGCGC CTCCTTCCAG CGACAAGAGC GTTTACCGCG ACGGTTACAC CCCGTGGTTC TGGAACAGCT ACGTAGGCAT CGGCAACAAG AGCGGCAAGC TCAGCTACAG CCTCCTCTAC TCGCACAGCG AGGACGACGG CTACCGCCAG AATGCACAGA CCCTTCTGAA CGACGTCAAG CTGAAAGCGC GCTACGACAT CGATGCGAAA CAGTACTTGC AGCTCAGCGC CTTTTATAAC GAAACGGAGG GCGGCTACGC ATACACATTA CCTTATGACG CGACAGTTGC AACCGGAACA TTCATCCCTC ACCCTGAACT TGCCTACGAT GTTTATGTGA ACGCCCGATT CCCCGCAGCA GGGCCATACA CGAAATACGA TGTCTATACT GACGATCTCA TTAAGCGGAA TAACGCACTG GCGGGCCTGA ACTACGTAAA CCTGCTGAGC GACAACCTCA CCCTTGACGC CCGGCTCTAC TACACCCGCA ACGCAACCAC TTACGAGTAT AACAATACGC CGGCAAACCA GATGTATGCA ACCGGCGCCA CCCGCTATCC GGGTGAATTC AATGAAACCA GCTCGAACCG GTACGGAGCA GGCGTAAAAC TTGACTGGCG AGTAAGCGAC AGCCATCGCC TTCTTTTCGG TCTTGACGGC AACATTATTG ACGTTCAGTC AACGCAGTAT ACAGGGGAAA TTCCCTCGGC ACACCCTTTA AGCAATAGTG ACCTCAACGA TATCCAGGAA AAAAACTTTG CCGCATTCGT GCAGGACGAG TGGAAACTCA CCGACAAGCT GACTGCCCTG CTCTCCCTGC GGTATGACTG GAGCGGTATC GATGCTGATG AGGTTACGTA TGTTGACTAC AGAAGGCCTG TTTATGTTAC TATCCCTGGG GCGGGAACTG TCGCAACATA TCCGTTTACG AAAACTGAAT CAATTGAAAA CCCGTCGGTC GATGCCATCA GCCCTCGTAT CGCGCTCAAC TACAAGGCCA CGGACGACAT GAGCTTCCGC GCATCGTGGG GAACAAGCTT CCGCGCGCCG ACGCTTGCGG AACGGTTTGT CCGAGATGCC GGAATCCTTA AAGGCGTACC TAACCCGGCG CTCGACAAGG AGACCATGAC CGCCTACGAG ATCGGCGTCT ACAAGCAGTT TGGCGACAAG GTCTCGCTCG ACGTGGCCGC ATTCATCAAC GATTACGACA ACCTGATCGA ATCAGTCAAG CTGCAGGGGA CAACATTCGA ATTCCAGAAC ATCACGAAGG CCCGTATCTG GGGCATCGAG ACAAGCCTGA ACATTCGTCC GAATCCTTCG TGGAACGTCA ATCTGGCTTA CACCTACATG AACGCCAAAA ACACCGACTA CAAGCCAAGC ACCCCTGCGG TTGCCATTGA CTCCAATCCC GATCCGGAAT GGCTGCCCAT GCGGCCGGAA CATACCGCCT CGGCAAGCGT GGCCTGGAAA GCCAACGACA ACCTGACGCT GAACCTGAAC GGACGGTACG TCGGCGAATA CAAGGCCGTG AATCTCTATA CCAATACCGA AGGCTACAAC TACCCCGGCG ACTTCGTGGT GTTCAACCTC GGCATGAAGT ACAAAATCAC CGACAACATC GGCGCAACAC TGCTCTGCAA CAACATCGGC AATGTGCAGT ACGAAGAGGC CGAATGGTTC CGCGCTCCGG GCAGAAGCTT CGTGCTTGGT GTTGACCTGA CCTACTGA
|
Protein sequence | MFFTLTLGDS YFPKLAYSCF PITVVGASVV IAGTTLGTAT DMNGNFVLKG VPAKQQRVSV SIVGYAPSSQ VVTVGAGQTA VANFSLGQTT VMASEVVVGA ALYKQDRLEV PVTANVVSAE KIKQEPNPTL DQVVEDVPGV VVTRAGGQTT STLQIRGSNT YQGGAIGTRV QGFYDGFPLN SPETGEVVWS SVNMNAADKV EVLKGSAATL YGSGAMGGVV NVFGHLPETL EVKAGTSAGF YDAPPSSDKS VYRDGYTPWF WNSYVGIGNK SGKLSYSLLY SHSEDDGYRQ NAQTLLNDVK LKARYDIDAK QYLQLSAFYN ETEGGYAYTL PYDATVATGT FIPHPELAYD VYVNARFPAA GPYTKYDVYT DDLIKRNNAL AGLNYVNLLS DNLTLDARLY YTRNATTYEY NNTPANQMYA TGATRYPGEF NETSSNRYGA GVKLDWRVSD SHRLLFGLDG NIIDVQSTQY TGEIPSAHPL SNSDLNDIQE KNFAAFVQDE WKLTDKLTAL LSLRYDWSGI DADEVTYVDY RRPVYVTIPG AGTVATYPFT KTESIENPSV DAISPRIALN YKATDDMSFR ASWGTSFRAP TLAERFVRDA GILKGVPNPA LDKETMTAYE IGVYKQFGDK VSLDVAAFIN DYDNLIESVK LQGTTFEFQN ITKARIWGIE TSLNIRPNPS WNVNLAYTYM NAKNTDYKPS TPAVAIDSNP DPEWLPMRPE HTASASVAWK ANDNLTLNLN GRYVGEYKAV NLYTNTEGYN YPGDFVVFNL GMKYKITDNI GATLLCNNIG NVQYEEAEWF RAPGRSFVLG VDLTY
|
| |