Gene Cpha266_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1860 
Symbol 
ID4571202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp2155390 
End bp2156337 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content52% 
IMG OID639766442 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_912300 
Protein GI119357656 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.346485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG TCTTTATGGG AACTCCGGAA TTTGCGGTTC CCTCACTCCG AAGCATTGCT 
GCCGAGCATA ACCATTTTGA GCTGGTGCTG GTCGTTACCG GCAGCGACAA GCCCCGCAGA 
GGCCGAAACG CCCCTTCGGA GCCTTCGCCT GTAAAGAGTG CAGCTCTTGA ACTCGGGTTT 
CAGGTTTACG AAACCGATGA TGTCTCCAGT TCCGATTTTC TCTCTGTTGT TGCTGACTCA 
GCTCCTGACG TGATTGTCGT TGCGGCTTTC AGGATTCTCC CGCCTGAAGT CTACGGTCAG 
GCAAAACTCG GAGCTTTCAA TCTCCATGCA TCGCTTCTGC CTGCCTATCG GGGTGCGGCG 
CCGATCAACT GGGCGATCAT CAACGGCGAA AAAGAGAGTG GTGTCACCAC GTTTTTTCTG 
CAAAAAACCG TTGACACCGG CAATGTTATC ATGCAGGAAA AAATTCCCGT TTTGCCCGAT 
GATAATGCTT CCATCCTTTC AGTAAAACTT TCACATCTTG GTGCGGAGCT TGTTGTGAAA 
ACATTGCGAA GCATTCAGGC CGGGACTGTT GAGGTTCAGG CGCAGGATGA CGCGTTTTTT 
TCGCGAGCGC CTAAACTCAC AAGGGAGAAC ACCCGTATCC GTTGGAATCA GCCTGTGGCA 
GTTCTGTCGG ATTTTATTCG CGGACTGGCG ATGAAACCTG CCGCCTGGAC AACCGTGCAG 
AACAGAACCA TGAAGATTTT CCGGGCGATT CCGTTTACAG AAGAGATCAC CTCTTCAATA 
GAGCAGCCTG GCAGCATTCT TGTGGAAAGG GGACGTTTTC TTGTGCGAGG CAGCGACGGC 
TGGCTTGAGG TGAAGCAGTT GCAGCCTGAA GGCCGAAAAC CCATGGAGGG CGCTGAATTC 
GCAAGAGGGT TCCGCCCTGA AAGCGGCACA TCCCTTTTGT TTGAGTAA
 
Protein sequence
MRIVFMGTPE FAVPSLRSIA AEHNHFELVL VVTGSDKPRR GRNAPSEPSP VKSAALELGF 
QVYETDDVSS SDFLSVVADS APDVIVVAAF RILPPEVYGQ AKLGAFNLHA SLLPAYRGAA 
PINWAIINGE KESGVTTFFL QKTVDTGNVI MQEKIPVLPD DNASILSVKL SHLGAELVVK 
TLRSIQAGTV EVQAQDDAFF SRAPKLTREN TRIRWNQPVA VLSDFIRGLA MKPAAWTTVQ 
NRTMKIFRAI PFTEEITSSI EQPGSILVER GRFLVRGSDG WLEVKQLQPE GRKPMEGAEF 
ARGFRPESGT SLLFE