Gene Cpha266_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1706 
Symbol 
ID4571066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1930889 
End bp1932331 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content52% 
IMG OID639766289 
Productputative transcriptional regulator 
Protein accessionYP_912148 
Protein GI119357504 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.383518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG CTGATCTCGA TATCCTGCTT CAGGAAGGTG AGGGGGTGAT GCTTGAGTAC 
AAGGAGGGTA TCTCTGGATC ATTCGCCCGT GAATTGGTGG CTTTTGCCAA CACGGCAGGA
GGAAAGATTC TGCTTGGTGT GCGGGATAAC GGGACAGTGA AGGGGATTGC TGATACAAAC
GTGTTGCGGG CGCGAATTCA GGATATTGCC CGGAATTGTG ATCCTCCTGT TCAGATTCTG
TTGCAGCATA TCGGCATGGT AACGGTGGTG ACGGTTCTTG AAAGTGATGC AAAGCCGGTG
CAGTGCAGCG ATGGCTTTTT TCTGCGGCAG GGAGCTGTAA CCCAAAAGCT CTCGCGTGAG
GAGATTCGGG ATATGTTCAG GCAGGGAGGG GCAGTAAGAT TCGATCTTTC CCCCTGTCCA
GCCTTTCGCT ATCCTGAGGA TTTTGATCCC GTTAAATTCA GAGAGTGGTT GCAAAAAAGC
ACTATTTCAC AGCCCAGCCC GGTGGAGGAT ATTCTGGTAA ACATTGAAGC TGCGGAGCGT
TCAGGCGGAA AACTTCTTTT CCGTAATGCC GGAGTGCTCT TTTTTGCCCG TGAGCCGAGG
CGTTTTTTCA ATCACGCTTA CGTCACCTGC CTGCTCTTCA AGGGGACAGT CAAGCTGCAT
GTTCTTGATC GCAAGGATTT TGCCGGAGGG ATTGTTGCCG ATATCGAAGA GAGCTTGCGC
TTTATTGAGC GTAACACACG CACAGCCTAT CGGATCGAGA AGCTCCAGCG TGAGGAGATT
CCGCAATATC CGGTTGCCGC TCTGCGGGAA GCTCTGACCA ATGCGGTGAT GCACCGCGAC
TGGTTTATCG AGGGGGGCAA TGTTTTTGTG GAGATTTACG ATGATCGCAT TGAGGTGTCA
AGTCCCGGTA CGCTTCCGAA AGGAATGCTT CCGGAGGATC TTGGAAGCAA AAGCATTCGC
CGTAATCCCC TCATTGCCGA TCTCCTGCAT CGTATTGCAT TTATCGAGAA GGCTGGAACC
GGAATCCGGC GGATGCGCGA TGGAGCAAGG GAGATGGGAT ATCCTGAACC GGAGTTTATT
GCAGGCAACT TTTTTACCGC ACTGTTTCGT CCGATTCATG AGGCGTCAGA GCAAGGTATC
CGACATGTAC CCGACATGCA CCCGACATGT ACCGCACATG TACCCGACAT GTACCCCGCA
TGTACCCCGC AAGTGATAGC TATTCTTAAC CTGGCTGAAG GAGAAGCAAA GACACGTGGT
GTGCTGCAAG AAGTCGCAAA GATCAAAAAT CGAGAGCATT TCTATCAGCA CTACCTTCAA
CCGCTTCTTT CCGCTGGGTT ACTGGAACGC ACCGTTCCCG ATAAACCCCG AAGTCCGAAG
CAGCGATATG TTACGACCGC AGCCGGTCGC GCCATGATTG AAAAATCTGA CAAGGAGTCC
TGA
 
Protein sequence
MKVADLDILL QEGEGVMLEY KEGISGSFAR ELVAFANTAG GKILLGVRDN GTVKGIADTN 
VLRARIQDIA RNCDPPVQIL LQHIGMVTVV TVLESDAKPV QCSDGFFLRQ GAVTQKLSRE
EIRDMFRQGG AVRFDLSPCP AFRYPEDFDP VKFREWLQKS TISQPSPVED ILVNIEAAER
SGGKLLFRNA GVLFFAREPR RFFNHAYVTC LLFKGTVKLH VLDRKDFAGG IVADIEESLR
FIERNTRTAY RIEKLQREEI PQYPVAALRE ALTNAVMHRD WFIEGGNVFV EIYDDRIEVS
SPGTLPKGML PEDLGSKSIR RNPLIADLLH RIAFIEKAGT GIRRMRDGAR EMGYPEPEFI
AGNFFTALFR PIHEASEQGI RHVPDMHPTC TAHVPDMYPA CTPQVIAILN LAEGEAKTRG
VLQEVAKIKN REHFYQHYLQ PLLSAGLLER TVPDKPRSPK QRYVTTAAGR AMIEKSDKES