| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1529 |
|---|
| Symbol | |
|---|
| ID | 4569579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1736450 |
|---|
| End bp | 1738105 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639766111 |
|---|
| Product | C-terminal processing peptidase-3 |
|---|
| Protein accession | YP_911975 |
|---|
| Protein GI | 119357331 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTG TTCTTACGGT TGTTATGATG ATCGTTGTCC TTTCATTCGG AATATTTCTG
GGCACCAGGC TTAATACGGG GCATGAGCAG GCACCTGGAT CACTAAAAAA AATGTATGAA
GCATATGGTT TGATCCGGGA GCTTTATGTG GATGAGGTTC AGGGAGATAG TCTCGTGAAC
TCTTCGATCA AGGGGATGGT AGACTATCTC GATCCTCATT CCGTCTATCT TGAGCCTGAA
AAGGTTGTCT ACTCTCAAGC TGAGCTTGAG GGTAATTTTG ACGGAATTGG TATAGAGTTC
GATATTATCA GCGATACGCT TCTTGTTGTT TCGCCGTTAT CGGGGGGGCC GAGTGCGGCT
GTAGGCGTTG CCGCAGGCGA CAGGATTCTG GCGATCGATT CGGTTTCCGC AATAGGAATT
ACGCATCAGG ATGTTTTGAG AAAGTTGAGA GGTACCCGAG GATCTCTTGT CTATTTGCGA
GTATTCCGTC CTTTCAACGG GAAATATCTT GATTTCAAAA TTACCAGGGG GCGGATTACG
ACATCGTCTG TCGACGCGGC ATTTGTTCTT CCAAACGGCA CCGGATATAT CAGATTAAGC
CGTTTTGCAG AAACAACTGC CGATGAGTTC CGTGCCGCAC TTGCCAGGTT GAAAAAACAG
GGGATGAAAA AGCTGCTTGT TGATTTGCGG GGAAATCCCG GAGGTATTCT CGATCAGGCG
GTAAGCGTAG CCGATGAATT TCTTCCGAAA GGGAAGATGA TTGTCTATAC AAAGAGTGTC
AAGAACAGTA TAGAGGACGC TCAATATCTG GCAACGTCAA ATGGCGGTTA TGAAACGGGA
GAGGTTATTC TGCTTGTCGA CAGGGGGAGC GCGTCAGCTT CCGAAATTCT TGCCGGGGCG
CTTCAGGATA ACAGACGGGC GCTTGTACTT GGCGAGTTGA CGTTTGGCAA GGGTCTTGTG
CAGAGGCAGT ATCCGTTTAA AGACGGCTCG GCACTTCGTC TCACCGTCTC TCGTTACTAT
ACTCCTTCAG GTCGTCAGAT ACAACGTCAC TACAAAAAGG GTGTTGACGG GCGCGAATCA
TATTATAATG AAGCCGCGAC AAGCCTTACG CCCCAGAAAC TGTTTGCAGA CAATGATAGT
TTATTGTATT TAAAAAATGG CGATATTTCT GTGTACAGAA CTGGCGGTTT CTCCGCGATA
CTCTCAGTAC CTGCTCAGAA AAGCGGCGAT TCGAGGAGTG TTGCTGCGTT GAGGAATGCC
GGAGGAGTTG TTCCCGATTA TTGGGTAACC GGTAAGCCCT ATTCCGATTT TTATCAGGAA
CTGTACCGTA CAGGTTCTTT CGATGATCTT GCGCAAAGAG TGCTTGACAA CCCTGCAAGT
TCTGTTCAGC AGTATCGGAA ATCCATGGAG CGGTTTCTTT CGGAATATTC TCAGGACAGC
AGACTGGAGT CGCTTGTCAG GAAAACGTGT GAGGCTAAAA AAATACGGTT TGACCAGTCG
GGGTTTCTTT TTGATCGCAG TAACATTGCT CTGGCAATAA AAGCAAGAAT TGCCCACCAG
CTTTTCGGTG CTGAAGCGCA GATAAGGGTA TATGTTGTTC AATCAGATCC TCTTGTGAAA
TTTTCTTCTC AAGTTCCTGT TACTCTTGTT CGCTGA
|
|---|
| Protein sequence | MSRVLTVVMM IVVLSFGIFL GTRLNTGHEQ APGSLKKMYE AYGLIRELYV DEVQGDSLVN
SSIKGMVDYL DPHSVYLEPE KVVYSQAELE GNFDGIGIEF DIISDTLLVV SPLSGGPSAA
VGVAAGDRIL AIDSVSAIGI THQDVLRKLR GTRGSLVYLR VFRPFNGKYL DFKITRGRIT
TSSVDAAFVL PNGTGYIRLS RFAETTADEF RAALARLKKQ GMKKLLVDLR GNPGGILDQA
VSVADEFLPK GKMIVYTKSV KNSIEDAQYL ATSNGGYETG EVILLVDRGS ASASEILAGA
LQDNRRALVL GELTFGKGLV QRQYPFKDGS ALRLTVSRYY TPSGRQIQRH YKKGVDGRES
YYNEAATSLT PQKLFADNDS LLYLKNGDIS VYRTGGFSAI LSVPAQKSGD SRSVAALRNA
GGVVPDYWVT GKPYSDFYQE LYRTGSFDDL AQRVLDNPAS SVQQYRKSME RFLSEYSQDS
RLESLVRKTC EAKKIRFDQS GFLFDRSNIA LAIKARIAHQ LFGAEAQIRV YVVQSDPLVK
FSSQVPVTLV R
|
|---|
| |