Gene Cpha266_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1399 
Symbol 
ID4569308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1588824 
End bp1590308 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content54% 
IMG OID639765986 
Productputative transcriptional regulator 
Protein accessionYP_911852 
Protein GI119357208 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA AATCTCTCTC CGAGCGGGAC ATATGCACGA AATTTATCAC TTCGGTGCAT 
GATCCGTTGA CACCCTTGCT GCAGGCAGGC GAAGGCTTTC ACACTGAATT CAAGCAGAGC
CTCGACAAAT CCTTTGTGGA GGAGGCCTGC GCCTTTGCCA ACTCCGGTGG CGGCAGAATT
CTTCTTGGTG TTGCCGACAG TGGCGTCATC AGGGGTATCG ACACCGGCAA CCTCATGCGT
TCCCGCGTCC AGGACATGCT GGGGCAGATC GAGCCGCTTC TGCATTGCGA AATCGAAGCG
GTTGGCGATG TTCTCGTTGT AACGATCCCT GAGGGAACTG AAAAGCCCTA TGGCTGCTTC
AGGGGATTTT TCATGCGTAT GGGTGCCAAT TCGCAGAAGC TCACCCGCAA CCAGATCATT
GAGTTTTTCC AGAAGGAAGG CCGAATCCGC TTCGATGAGC TGAGCCATCC GAAAGCCGTC
TATCCCGACG ATTTCGATCC GGACGCATTT ACCCGCTTTC TGAAACTGGC TGGCATCAGC
CCGAGCATCG ACCGCGAAAC CCTGCTGCAC AACCTCGATT GTCTGACTGC CGATAACCGG
TTCACAAACC TTGGCGTGCT GTTCTTCACG AGAGACATTG ATTTTTTTCT CAACCATGCA
GTGGTCGTCT GTGTGCTCTA TCGAGGCAGT GAAAAAGTCA CCATCCTTGA CAAGAAGGAC
TTCACGGGAA ACATCGTGGA AAATATCGAC AATGCCCTGC TCTTTGTGAA GCGGCATACC
AAGGTGCGCC TCAGGATCGA GCACCTGCAG CACGAAGAGA TTCCAGACTA CCCGGAAGTC
GCTCTGCGGG AGGCCATTAT CAATGCGGTC TGTCACCGTG ATTATTTCGA CAGGCGAGCC
AATGTCACGA TCGAGGTCTT TGCCGACCGG GTGGTCATCA CCAACCCCGG TGGCCTGCCG
AGCGGTCTCT CTCCGGAAGA GTTCGGCACC AAGAGCGTGG CCCGAAATCC CCGCATTGCA
TCCCTTCTTC ACCGCATCGA CTACATCGAA AAGATCGGAA CCGGCATTAA CCGTATCCGC
CAGGCGGTCG CCGAACACGG CGGTACCGAA CTGGAACTGC GCTTCAACGA TTTTTTCACC
GCGACATTCC GGTCAAAGAT ACAAGTTGCC CAGGAAGTTA CGGGAGAAGT TAGTGAGCAA
GTCAAGGCCC ATGATGAGGT CCATGATGAG GCCCATGAGC TTACCGATAC GGAGAGAAAG
ATTCTTGGGG CATGTCGCGA GGCGACCAGG AGTGCTCCGG ATTTGCTGGA AGTGCTCGGA
TATCGAACAC GAACAGGGAA CTTCAAAAAA GCAATGTCCC GACTTTGCGA CGTACTGAAA
TTGTTGGAAC CTACGCTTCC GGATTCAGCT CGCAGCAAAA ACCAGAAATA CCGCCTTACC
GATAAGGGCC GCGAAATCCT GCGGCAGGAG GGGAGCGATG AATAA
 
Protein sequence
MDKKSLSERD ICTKFITSVH DPLTPLLQAG EGFHTEFKQS LDKSFVEEAC AFANSGGGRI 
LLGVADSGVI RGIDTGNLMR SRVQDMLGQI EPLLHCEIEA VGDVLVVTIP EGTEKPYGCF
RGFFMRMGAN SQKLTRNQII EFFQKEGRIR FDELSHPKAV YPDDFDPDAF TRFLKLAGIS
PSIDRETLLH NLDCLTADNR FTNLGVLFFT RDIDFFLNHA VVVCVLYRGS EKVTILDKKD
FTGNIVENID NALLFVKRHT KVRLRIEHLQ HEEIPDYPEV ALREAIINAV CHRDYFDRRA
NVTIEVFADR VVITNPGGLP SGLSPEEFGT KSVARNPRIA SLLHRIDYIE KIGTGINRIR
QAVAEHGGTE LELRFNDFFT ATFRSKIQVA QEVTGEVSEQ VKAHDEVHDE AHELTDTERK
ILGACREATR SAPDLLEVLG YRTRTGNFKK AMSRLCDVLK LLEPTLPDSA RSKNQKYRLT
DKGREILRQE GSDE