Gene Cpha266_1344 details

Gene Information

• Locus tag: Cpha266_1344
• ID: 4569715
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 1539316
• End bp: 1539939
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 639765933
• Product: NLP/P60 protein
• Protein accession: YP_911799
• Protein GI: 119357155
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0791] Cell wall-associated hydrolases (invasion-associated proteins)

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGAATC AAGGAATGCC GCAGCCTGCT CGCCATGGCT CAACAGCGCC GACGCGATAT 
GTTCGTCTGT TTTTCTTTTC TCTGATATTC TTAGCCGCAA CGTTCGCCAC TACACCCAAA 
GCTTTTGCCG AACCTTCCTT TTCCCCCGGA AACCCGATAG AAAAAACGAG CCACCTTTCC 
ACCCTGCAAC AATCGGCCTG TTCCATGGAG TCGCTCTTCA GGGAAGCGCG ACAGTATTTC 
GGCATACGCT ATCGATGGGG CGGCCAGACG CCTGCCGGGT TTGACTGTTC CGGGTTTGTG 
CGCTACATGT TCGGCAAAGT ATTCCAAATG CATCTTCCCC GATCATCACG CGAAATGGCA 
GCAATTGGCA GCAAAGTTAA TCGCAGCGAG CTGCAGCCCG GAGATCTTGT CTTTTTCGGA 
ACCAAAGGCG GAAGAATCAA CCACGTAGGA ATCTTTGTCG GTAACGACAC ATTTATGCAC 
TCCTCGCTCT CAAAAGGCAT TACCGAAGAC AAACTCCAGC AGAACTACTA CGATAAACGA 
TTTATTGGAG GCGTCAGGCT GCCGGAACTC CCCAATATCA TGGATAACTC CCTCATGCCC 
TCCCAACAAG AACAAGGCAG TTGA 

 

Protein sequence

MQNQGMPQPA RHGSTAPTRY VRLFFFSLIF LAATFATTPK AFAEPSFSPG NPIEKTSHLS 
TLQQSACSME SLFREARQYF GIRYRWGGQT PAGFDCSGFV RYMFGKVFQM HLPRSSREMA 
AIGSKVNRSE LQPGDLVFFG TKGGRINHVG IFVGNDTFMH SSLSKGITED KLQQNYYDKR 
FIGGVRLPEL PNIMDNSLMP SQQEQGS