Gene Cpha266_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1310 
Symbol 
ID4570888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp1501941 
End bp1502609 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content51% 
IMG OID639765899 
ProductABC transporter related 
Protein accessionYP_911765 
Protein GI119357121 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCCTT TGCTTGAAAT CAACGATCTC TCGTTTACCT GGCCGGAGTC ATCCCTTTCG 
GTTTTCGATC AGTTACATCT GAAGGTGGAG GAAGGCGATT TTATTCTGGT CAAAGGGGTG 
TCCGGATCGG GCAAGTCAAC GCTTCTGCGT CTCATAGTCC GTTTGAACGA ACCACAGCGC 
GGCTCTATTC TTTACAGGGG TATTTCTGTC ACGACGATCG CTCCTGCGCT GCTTCGCCGT 
TCTCTCTGTT ATGTGGCACA AATTCCCCGT ATGGCAGACG CAACGATTCG CGAGAACCTG 
CTGCTTCCGT TTACCTTTGC CGTTAATGCC GAAAAATCTC CACCCGATAC CAATAAACTG 
CAGGGCATGC TTGAAGCATT TTATCTCTCG GGTCTTTCGC TCGACCAATC GGCGCTCAAA 
CTCTCCACGG GGCAGCAGCA GCGGCTTGCT TTCATGCGGG CCATGCTGCT TGAACCGGAT 
CTTCTGCTTC TTGACGAACC GACCTCGGCT CTTGATGCCG AAAGCGCCGA AATGATTTTT 
TCGCTCATGC AGCGTCTCAG CCTTGAGGGG AAAACAATCA TCGCGGTAAC GCATAGCGAC 
GTTGCCATAG AGAGTCCCCG CCTGCTTACG GGTCTGCTTG AAAATAAAAA TCTTGTCCTG 
AAGAAATAA
 
Protein sequence
MIPLLEINDL SFTWPESSLS VFDQLHLKVE EGDFILVKGV SGSGKSTLLR LIVRLNEPQR 
GSILYRGISV TTIAPALLRR SLCYVAQIPR MADATIRENL LLPFTFAVNA EKSPPDTNKL 
QGMLEAFYLS GLSLDQSALK LSTGQQQRLA FMRAMLLEPD LLLLDEPTSA LDAESAEMIF 
SLMQRLSLEG KTIIAVTHSD VAIESPRLLT GLLENKNLVL KK