| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1193 |
|---|
| Symbol | |
|---|
| ID | 4570061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 1349493 |
|---|
| End bp | 1350695 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639765787 |
|---|
| Product | internalin-related protein |
|---|
| Protein accession | YP_911653 |
|---|
| Protein GI | 119357009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0638484 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGCAGA ACACCTATAA CAAATGCCCG GTATGCAGTT TTCCGCTCTC CCTTGAAAGC
GCTGTATGCC CGAGGTGCGG TAATGACATT CTTGAAGATA TCTCTTCTCT TGATCAGCAA
AGCGAGGAGC TTCATCGAAA AACAATGGAT GAAAAAAAAG CCGAATGGTA CACCTGGTGT
ATAACTGAAA ATCTCAATAT TTCCGATAAC GAACTATCGA CAAAACCTCC TGATAGAGAG
AAGACATCAG AGTCCAGACA TCTCTTCTCT ACTCCTGATG AACAGGAATT GCTCCGTACC
GCATCAAAAG CGATCCTTCT GAAGGATCAT TCGTTACGAA AAAAATGGTG GCAAGCGCTC
AGTGCCGACT GGAAAGAGGT TATTAAAAAC ACCATAAAAA TAGTTCGCGA ACCCAATGAT
CAGGAAATCC TTGATTTTTT TCAAACCACT CATTTCCGAT GTGACAACAG AAGGATTCAC
GACCTCTGGC CAATACGAAT ACTGGAAAAT CTTGTACAAC TTCGTTGCGA TGAATCGCCG
GTTGAAAGTC TTGAACCCCT CGCGCATCTC AGCTCGCTGC AACGAATCTA TGCCTTTGAT
TGTGATTTCT CCTCGCTTGA GCCCCTTCGC AAACTGAAAC ATCTGAAATT GCTCTGGATA
TCGAGCACCC AGATAAGTAA CCTTGACCCT CTCCGTGAAC TTACCAGTCT TGAGGAGCTG
TACTGTTCGG AAACCCTTGT AAAAGATCTG GATGCACTGG CGGAACTGGT CAATCTTGAA
AAGCTCAGTT GTTATAAAAC CGAAATCGCA TCTATTGAGC CTCTGGCAAA TCTTTCGAAC
CTTATTGAGT TGGGCATCAA CAACTCGAAT GTCACCGATA TCCGACCGCT TTCAAAACTT
ACCGGTATTG AATACCTGCG GTGCAATAAA ACAGGAATCA TGAATCTTGA ACCACTGGCA
AACCTTGCAG GACTCAGAGA ACTGAGTATT TCAAGAACAC GGGTGGAGAG CCTTGAACCT
CTTGCGGAAC TTATGGAGCT TGAAGAACTT GATTTTTCAA ATACGGAAGT ACAATCCATT
CTCCCCCTCA TGCAACTCGA AAAACTTGAA AAAATCGAGC TCTCTGCAGG AACGGTTCCT
GAAAAAGAAC TGGAAAGATT TATTGAATTG CATCCTGATT GCGAAATTCT TCTGACGCAA
TAA
|
|---|
| Protein sequence | MEQNTYNKCP VCSFPLSLES AVCPRCGNDI LEDISSLDQQ SEELHRKTMD EKKAEWYTWC
ITENLNISDN ELSTKPPDRE KTSESRHLFS TPDEQELLRT ASKAILLKDH SLRKKWWQAL
SADWKEVIKN TIKIVREPND QEILDFFQTT HFRCDNRRIH DLWPIRILEN LVQLRCDESP
VESLEPLAHL SSLQRIYAFD CDFSSLEPLR KLKHLKLLWI SSTQISNLDP LRELTSLEEL
YCSETLVKDL DALAELVNLE KLSCYKTEIA SIEPLANLSN LIELGINNSN VTDIRPLSKL
TGIEYLRCNK TGIMNLEPLA NLAGLRELSI SRTRVESLEP LAELMELEEL DFSNTEVQSI
LPLMQLEKLE KIELSAGTVP EKELERFIEL HPDCEILLTQ
|
|---|
| |