Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1123 |
Symbol | |
ID | 4570330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1269901 |
End bp | 1270710 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639765719 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_911587 |
Protein GI | 119356943 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0449759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCTGA AACAACGTTT TCCCTTCAGA ATCGGAACTA CTTCCTATAT CATTCCTGAC GCTCTCTGGC CCAATGTCGA ATATCTTTCA AAACAGGTGG ATGATATCGA ACTCCTGCTT TTTGAGTCAC ATGAGTTCTG TAACCTTCCC TCTCAAGATG AGGTCTTCCG TCTTTTCGAG CTTGCCATTA AAGAGGATCT TACCTATTCG GTTCATCTCC CTCTCGATAC CTTTCTCGGT CATGCAAGCC TTGCTGAACG CGAACGCTCA ATAGAAAAAT GTTCCAGAAT TGTCGAACTG ACGCGGCAGC TTCCGGTTTC AGCGTTTGTG ATGCACGCCG AAGCAGGCCC GGGTATTGAT ATTGTCGCAT TTGACGACAG GGAAAAAACA GCTTTTGCCG CACATGTTGC CGAATCAGTC AAAAAACTGA TTGAAAACAC AGGCATGGCC CCATCCATGT TTGCGCTTGA AACACTCGCA TACCCCTTTG CAATCCTCGA ACCGGTTATT GAAGATGCAG GCCTCTCGGT AACGCTTGAT ATCGGTCATC TCGAACTCAT GGGCTATGCC GTAGAGGCGC ATCTTCAGCG ATGGCTTGGA AAAACCCGTG TGCTGCATCT GCACGGCATA AAAAACGGCA AAGACCATAA CAGCCTGCAA CATATGCGTC AGGAGACACT TGCACTGGTA ATGCAGGCCC TTTCGGATTT TCCGAATCCT GGAAGAGTGG TGACGATGGA GATATTCTCC GAGAGTGATT TTTTCGAATC AGCAGAAGCC ATGGAACCGT ATGCTGTAAT TCCCGGATGA
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Protein sequence | MNLKQRFPFR IGTTSYIIPD ALWPNVEYLS KQVDDIELLL FESHEFCNLP SQDEVFRLFE LAIKEDLTYS VHLPLDTFLG HASLAERERS IEKCSRIVEL TRQLPVSAFV MHAEAGPGID IVAFDDREKT AFAAHVAESV KKLIENTGMA PSMFALETLA YPFAILEPVI EDAGLSVTLD IGHLELMGYA VEAHLQRWLG KTRVLHLHGI KNGKDHNSLQ HMRQETLALV MQALSDFPNP GRVVTMEIFS ESDFFESAEA MEPYAVIPG
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