| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0928 |
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| Symbol | |
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| ID | 4570623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 1057012 |
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| End bp | 1058589 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639765528 |
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| Product | phosphodiesterase |
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| Protein accession | YP_911400 |
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| Protein GI | 119356756 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.111648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTATTT TCTTCATAAG CCTGGTTTTG ATTGTTCTTG CATCAGTTGT TTTTTTTGTG
GGTGGTTTTT TTCTGGGACG CTATTTTCTC GAACGAATAG GTACGACAAA AATCCTTGAA
GCAGAGGAAC GCGCAGTGCA GATTGTCCAG GAGGCTCAGA AAGAGGCCAA TGAATACAAG
GAACTCAAGG TCAGCGAGGT AAATCAGGAG TGGAAAAAGA AGCGAAGGGA GTTCGATCAG
GAGGTTGTTA TCAAGAACAA CAAGTTCAAC CAGATGCAGA AACAGGTTTT GCAGAAGGAG
GGGCAGTTGA AAAAGCAGTC CCAGGATCTC AGGGATATGG AACGGAAGCT TCAGGATCAG
CGTAAGGAAA TTGAGCAGAC CATGGAGACG GTGAACCTCC GTTCTTCCGA GCTCGAAAGA
ATTACCCTGG AGCAGAATCA GCGTCTTGAG AGCATCAGTA ACCTTCAGGC TGACGAAGCC
AGGCAGATGC TGGTGGACAA CATGCTTGCA AAAGCAAGGG AAGAGGCTAC CGAGACTATT
CACCAGATTC ATGAAGAGGC TGAACAGCAG GCAGAGCGGC TTGCTGAAAA AACGCTGCTC
ACAGCTATTC AGAGAATCTC TTTTGAACAG GCTACTGAAA ACGCCCTCTC TGTGGTGCAT
ATTCAGAGCG ACGAACTCAA AGGCAGGATT ATCGGACGGG AAGGCCGCAA CATCAAGGCA
TTTGAAAATG CTACCGGTGT CGATATTATT GTTGACGATA CCCCTGAGGT GGTTATTCTA
TCCTGTTTTG ATCCGCTGCG TCGCGAACTT GCAAAACTCA CCCTGCAGAA ACTTCTGGTC
GACGGCATTA TTCATCCGGT TGCAATTGAA AAAGCCTATG AGGATGCTAA AAAAGAGATC
GATGACGTGA TCATGAGCGC AGGCGAAGAG ACCATATCCT CATTGCAGAT ACCGGATATG
CCTGCCGAGG TTGTGGGTTT GATCGGAAAA ATGAAGTACC ACACGGTTTA TGGCCAGAAC
CTTCTGCAGC ACAGTCGTGA GGTAGCCATG CTTGCCGGAC TGATGGCTTC TGAACTCAAA
CTCGATGCAC GGGTAGCTAA AAGAGCCGCA CTTCTGCATG ATATCGGCCT TGTGCTTCCT
GAAAGCGATG AGCCGCATGC CATTGCCGGA AGAAACTTCC TGAAAAAGTT CAATGAGTCA
GCCGTTGTGC TCAACGCAGT TGCTGCGCAT CACGGCGACG TGGTCAAGGA ATCACCGATT
GCGGAACTTG TTGATGCGGC AAACGTTATT TCTCTTTCAC GCCCAGGCGC TCGTGGCGCG
GTAACCGCCG ATGGAAATGT CAAACGTCTG GAGAGTCTTG AGGAAATTGC CAAGGGATTT
CCCGGTGTAC TCAAGACCTA TGCGCTGCAG GCAGGACGCG AGATCCGGGT TATTGTCGAG
GGCGACAATG TGAGCGACTC ACAGGCAGAT GTTCTTGCCC ATGATATCGC TCGCAAGATT
GAGTCCGAGG TTCAGTACCC CGGACAGATA AAGGTATCGA TTATTCGCGA AAGACGTTCA
ATCGCCTACG CAAAGTAA
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| Protein sequence | MGIFFISLVL IVLASVVFFV GGFFLGRYFL ERIGTTKILE AEERAVQIVQ EAQKEANEYK
ELKVSEVNQE WKKKRREFDQ EVVIKNNKFN QMQKQVLQKE GQLKKQSQDL RDMERKLQDQ
RKEIEQTMET VNLRSSELER ITLEQNQRLE SISNLQADEA RQMLVDNMLA KAREEATETI
HQIHEEAEQQ AERLAEKTLL TAIQRISFEQ ATENALSVVH IQSDELKGRI IGREGRNIKA
FENATGVDII VDDTPEVVIL SCFDPLRREL AKLTLQKLLV DGIIHPVAIE KAYEDAKKEI
DDVIMSAGEE TISSLQIPDM PAEVVGLIGK MKYHTVYGQN LLQHSREVAM LAGLMASELK
LDARVAKRAA LLHDIGLVLP ESDEPHAIAG RNFLKKFNES AVVLNAVAAH HGDVVKESPI
AELVDAANVI SLSRPGARGA VTADGNVKRL ESLEEIAKGF PGVLKTYALQ AGREIRVIVE
GDNVSDSQAD VLAHDIARKI ESEVQYPGQI KVSIIRERRS IAYAK
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