| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0633 |
|---|
| Symbol | |
|---|
| ID | 4569787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 714404 |
|---|
| End bp | 717913 |
|---|
| Gene Length | 3510 bp |
|---|
| Protein Length | 1169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639765231 |
|---|
| Product | helicase domain-containing protein |
|---|
| Protein accession | YP_911112 |
|---|
| Protein GI | 119356468 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATTG AAGATATAAT CCAAGGCAGT TCCCTTACAG GTCTTGAACC TTCGACTGTT
GCAACGGTTA TCGCGGTCGT TCCAATTGCC GATGGAGCCG TTCGTGTTAT CTATCAGACT
CCTGACGGTA CGCTCAAAGA ACGGCTTTTG GGCCGGGCTG ACGAAGAGAG CGTTGCTGTT
GCTATCAGTG AGCGCCCCTG GTCTTTTGAC GGAGATGGTG AGGCATTCAA ACTCACTGTT
GAGGCCAAGC GCATTGATCT TGCTTTTCTG TTTGACCCGA TGATGGCAGT TCATACATCA
AATGTTGAAC CCCTTCCGCA TCAGATCACT GCCGTATACG AATCCATGTT ACCTCGTCAA
CCGCTGCGGT TTGTTCTTGC TGATGATCCC GGTGCAGGCA AGACCATCAT GGCAGGCCTA
TACATTCGTG AGCTTATCAT GCGTGCCGAT GCTCGGCGTA TCGTCATCGT TGCACCCGGA
AGCCTGGTTG AGCAGTGGCG TGAGGAACTG TTCGAGAAGT TTGGACTCGA ATTCCGCGTC
TTTACCAGAG ATCTGGAAGC GGCGACCCCG AGCGGAAACC CTTTTGAAGA CATTGATCAT
CTTATTGTCC GTCTTGACCA GATGGCCCGA AACGAAGAGC TGCAGGACAA GCTTTGTGCT
GCCGGATGGG ATCTTGTCGT GTTCGACGAG GCGCACAAGC TTGCTGCACA CTTTTTTGGC
AATAAAATGC AGAAGACGGG CCGCTTCAAG TTAGCCGAAA AGCTTGGTGA GCAGACTCGC
CATCTCCTGC TGATGACGGC AACACCGCAC AACGGCAAGG AGGAGGATTT CCAGTTGTTC
CTCTCTCTAC TCGACTCCGA CCGCTTTTAT GGAAAGTTTC GTGATGGTGT TCACAAGGTT
GATTGTTCCG ACCTTATTCG CCGAATGGTT AAGGAGAAAC TGGTCAAGTT TGATGGTACA
CCTCTTTTTC CTGAGCGCAA GGCATACACG GTCAATTACC AGCTTTCAGA CCTTGAAGCG
GCACTCTACG AAGCAGTAAC CGATTATGTG AAGACAGAAA TGGGCAAGGC TGACCAGCTT
GACGGAAAAC GCAAGGGCTC GGTTGGCTTT GCGCTTACCT CCCTGCAGCG TCGTTTGGCC
TCAAGCCCTG AAGCCATCTT TCAGTCACTC AAACGTCGGC GGGAACGACT CGAACGTCGT
CTTCGTGAGG AAAAAATGGG TGCCAGAGGG CAACAACTTC TTGCTGAGAC ACTCATCGAT
GTTCCCGAGG ATGAGGATGA TTTCAATGCC GAGGAGCAGG AAACAATGGA AGAGACGCTG
GTCGTTCAGG CCACTGCTTC ACAAACTATT TCGGAGCTGG AGGGTGAGAT CATCATCCTT
CACTTTCTTG AACAGCAGGC AAAAGCCCTT GTTGCATCCG GCAAAGATCG CAAGTGGGAT
GAACTCTCTC GCATTCTCCA GAACGAACCC CAAATGCGGG ATGCTGGCGG GCGAATGCGC
AAAATTATCA TTTTCAGTGA GCACCGGGAC ACGCTGAATT ACCTCCACGA AAAAATTGCG
GGTGTGCTTG GCAGTCATGA TGCTATTGTT GTCATTCATG GTGCTGTTCA CCGTGACGAC
CGCCGGAAAG CTCAGGAGCT TTTTCGCTCT GACCCCGAAA TCCGTGTACT TGTTGCCACC
GATGCAGCCG GTGAAGGCAT CAACCTTCAG AATGCCAATC TGATGGTGAA CTACGATCTG
CCCTGGAACC CCAACCGCCT CGAACAGCGG TTCGGGCGTA TTCATCGTAT TGGCCAGCAG
GAGGTTTGCC ATCTCTGGAA CCTTGTCGCC AAGGAGACTC GTGAAGGTGA TGTCTATTTC
CGTTTGCTTG AAAAGCTTCA AGTAGTGAGT GATGCACTCA AGGGTGAGGT ATTTAACGTT
CTTGGTGAGG TGTTTGATGG CATCAGCCTC AAGGATTTGC TTCTGGAAGC GATTCGCTAT
GGTGATAAAC CTGAAGTGCG TGCTCGACTC AGTCACAAAA TTGATATCGC TCTCGATCTT
GATCACTTGA AAGAGATTCT CAATCGAGAT GCACTTGCGC AGGAAAGTTT CAGCACAGAA
CGACTTTTTG CAGTGAAAGA AGAGATGGAA AAGGCTGAAG CCCGGCGTCT TCAGCCCTTC
TTTGTTCGAT CCTTCTTTAT GAAAGGCTTT GAGTCACTCG GTGGTTCGAT CTATCCCCGC
GAATCTGGCC GTTTTGAAAT CACGCGAGTT CCTGCCGAGT TGCGTGAACG TGACCGCCTC
ATTACCGGGC GCAATCGCCG GGACCTTGCT CCGGTTCTGC ATCGTTACGA ACGGGTTTGT
TTTACCAAGG ATGCCGTGCG TCCGGTGGAT AAACCCGGCC TTGCCTTCGC CAATATGATT
CATCCCGGCC ACCCGCTTAT GCTTGCTCTC AGCGACCTCT TGCTGGAGCA GCATGCCAAC
CTCCTCCGTC AGGGCACTAT CCTTGTTGAC CCGGCTGATG ATGGCGACCA GCCCTCGTTG
CTCTTTCTCC TCACCCACGA GGTGAAATCC GGTGATGGCA TGGTTATTTC CAAACGACTG
CAATTTGTTC GGGTTATGCC CGACGGCAGC GCCACCTTCG CCGGGTGGGC GCCGCATTTA
GACCTTGAAC CACTTGCTTC TGCCCAGCGA CCACTTTTGG CTGAAACACT TGCTGCACCC
TGGCTCAACG CTGGCTTGGA AAACCGTGCT CTTGCCTTGG CAGCATCAAC ACTTGTCCCT
CAGCACTTCA GTGAGGTCGC TGACCGACGT ATTGCCCATG TTGACAAGAC TCTTGCCGCT
GTCCACGAGC GTCTGACGAA AGAGATAAAT TTCTGGTCAG ACCGTTTCGA GAAGCTTACC
GACGACAAAA AAGCAGGAAA GGATGTACGG CTCAACCTTG AAAATGTTCG TCGAACGCTC
AGCGATCTCG AAGCCCGGCT GGAGCATCGC AAGAAAGAGC TGCTCTCCAT GCGTCATGTC
ACCTCTGCAA CACCGGTTGT GCTCAGTGGA GCACTGGTTA TTCCTGCTGG ATTGCTTCGT
GTACTGCAAG GTGAGCCTGC ATCCTGCAGC TCTACATTTT CTGCTAATCC CGCAGCCCGT
TCACGCATCG AGCAGCTTGC CATGCACGCT GTTCGCATCG CTGAAGAAGC CCGAGGATGC
CATGTGGTAG ATGTCTCCGC CCAGAAGTGC GGTTGGGACA TTACCTCATA CCCGCCGGCA
ATTGATGGTA AACAACCTGA ATCTCGGCAT ATCGAAGTCA AGGGGCGAAT AAAAGGTGCA
ACTACGATTA CCGTTACTCG TAATGAAATG CTCTATGCCC TCAATCAGGC CGAAAAATTT
GTACTTGCCA TTGTGCAAAT TGACGAGAAT GAGCAGATTG ATGGACCCTA CTATCTGCGG
AGCCCCTTTG ATGCAGAACC GGGTTGGGGC GTCTCATCAA TCAATTACAA TATCCAGGAT
CTTCTCGCTC TTGCAGGAGG CAATCAATGA
|
|---|
| Protein sequence | MRIEDIIQGS SLTGLEPSTV ATVIAVVPIA DGAVRVIYQT PDGTLKERLL GRADEESVAV
AISERPWSFD GDGEAFKLTV EAKRIDLAFL FDPMMAVHTS NVEPLPHQIT AVYESMLPRQ
PLRFVLADDP GAGKTIMAGL YIRELIMRAD ARRIVIVAPG SLVEQWREEL FEKFGLEFRV
FTRDLEAATP SGNPFEDIDH LIVRLDQMAR NEELQDKLCA AGWDLVVFDE AHKLAAHFFG
NKMQKTGRFK LAEKLGEQTR HLLLMTATPH NGKEEDFQLF LSLLDSDRFY GKFRDGVHKV
DCSDLIRRMV KEKLVKFDGT PLFPERKAYT VNYQLSDLEA ALYEAVTDYV KTEMGKADQL
DGKRKGSVGF ALTSLQRRLA SSPEAIFQSL KRRRERLERR LREEKMGARG QQLLAETLID
VPEDEDDFNA EEQETMEETL VVQATASQTI SELEGEIIIL HFLEQQAKAL VASGKDRKWD
ELSRILQNEP QMRDAGGRMR KIIIFSEHRD TLNYLHEKIA GVLGSHDAIV VIHGAVHRDD
RRKAQELFRS DPEIRVLVAT DAAGEGINLQ NANLMVNYDL PWNPNRLEQR FGRIHRIGQQ
EVCHLWNLVA KETREGDVYF RLLEKLQVVS DALKGEVFNV LGEVFDGISL KDLLLEAIRY
GDKPEVRARL SHKIDIALDL DHLKEILNRD ALAQESFSTE RLFAVKEEME KAEARRLQPF
FVRSFFMKGF ESLGGSIYPR ESGRFEITRV PAELRERDRL ITGRNRRDLA PVLHRYERVC
FTKDAVRPVD KPGLAFANMI HPGHPLMLAL SDLLLEQHAN LLRQGTILVD PADDGDQPSL
LFLLTHEVKS GDGMVISKRL QFVRVMPDGS ATFAGWAPHL DLEPLASAQR PLLAETLAAP
WLNAGLENRA LALAASTLVP QHFSEVADRR IAHVDKTLAA VHERLTKEIN FWSDRFEKLT
DDKKAGKDVR LNLENVRRTL SDLEARLEHR KKELLSMRHV TSATPVVLSG ALVIPAGLLR
VLQGEPASCS STFSANPAAR SRIEQLAMHA VRIAEEARGC HVVDVSAQKC GWDITSYPPA
IDGKQPESRH IEVKGRIKGA TTITVTRNEM LYALNQAEKF VLAIVQIDEN EQIDGPYYLR
SPFDAEPGWG VSSINYNIQD LLALAGGNQ
|
|---|
| |