Gene Cpha266_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0504 
Symbol 
ID4569274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp551964 
End bp555503 
Gene Length3540 bp 
Protein Length1179 aa 
Translation table11 
GC content48% 
IMG OID639765103 
Productchromosome segregation protein SMC 
Protein accessionYP_910985 
Protein GI119356341 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1196] Chromosome segregation ATPases 
TIGRFAM ID[TIGR02168] chromosome segregation protein SMC, common bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTTT CAAAAATTGA ACTTTTCGGA TTCAAAAGTT TTGCCCACAG AGTCACCATA 
AAATTCGACA AGGGGCTTAC CGCTATTGTT GGACCAAACG GGTGCGGGAA AACCAATGTT
GTTGATGCAA TCAGATGGGT GCTCGGGGAA CAGAAATCCT CTCTGCTGCG TTCGGAAAAA
ATGGAAAACA TTATTTTCAA CGGATCAAAA AACCTCAAAC CGCTGAGCCT GACCGAAGTA
TCCCTCACCA TCGAAAACAC CCGAAACGTC CTTCCAACCG AATATACTGA AGTTACCGTC
ACCCGTCGCC TCTACCGAAA CGGCGATAGC GACTACCTCC TGAACCAGGT ACCCTGCCGT
CTGAAGGATA TTCTTGACCT TTTCACCGAT ACCGGCATGG GCAGCGATGC TTACTCGGTC
ATCGAACTGA AAATGATCGA AGAGATCATC AGCAACAAAA GCGAAGAACG ATTAAAACTT
TTTGAAGAAG CCGCGGGCAT TACCCGCTAT AAACAACGAA GAAAACAAAC ATTCCGACAG
CTTGAAAGCG CATCGCGAGA CCTGTCAAGA GTGGACGACG TTATAGCTGA AGTGGAAAAA
AAGGTCAGAA ATCTCAAACT GCAGGTAAAA AAAGCCGAGA AACTTCGCGA AATAAAAAAC
AAACTCAGAG AACTCGACCT GATACTGAGT CAGAATCAGT TTGCAGCCTG CCAGACCAAA
CTTGAGCCAC TCAGGCGGCA ACTATCACGT GAAGAGATGC TCGACCACGA GCGGGCCGCT
GCGATAGCAC AAAAAGACAG CGCTGTACAA GATGCGGAGG TCATGCAGTT GAACAAGGAA
CAGGAACTTG CTTCATCACA AAAAAAGCTT AACGATCTCA ACAATCGCAT CCACGAGCTT
GAAAAACAGT TGCTGCAAGA TGAGGAACAG AGAAAAAGCC TCTCTTCCGG CATCGGGCGA
ATCAAAACGA CAGCCGGAGA TAAGCAGAAA AAAAGCCTTG CCTTCGAACT GACGGCTAAA
GCACTTGGTC ATGAGAAACC GGCCCTGCAA AAAGAGTGCG ACAAACAACT TGCCGAATAC
AAAAAGCTCT CAGCAGAACA TGAAGAGCTA AACTCCCGAT TGCAGGAGCA CCGTCAGGAA
CTTGCCGAAA AGCGAAAAAA AAACACTGAA CTTGAAAAAA CGCTTAACCG CCTCTCTTTT
ACACGTCACA GCCTCGAAAC AAAAATAGAA CACCGGAAAA CAACATCTGA CAGGCTTGGA
CAGCAAAAAC TCGAAATCGC AAGGCTGCTT GACCAATCCT CATCGGACGA ACGTGAAATT
TCAGAAAAAA TAAACGCACG GAGCGAGCTT GTCAACGAGT CACGAAAAAG TGACGAGAAC
ATAAAAAACC AGATAAAGAT CCTCAGGCAA AGCATTGAGA CACAAAAAGA GAAGCTGCTC
GGCTTTCGTT CAGAGCGCGA CCAGCTCCGG AACCAGATTA TGCTTGCCAA TGCCGTTCTT
GACAATTTCG AAGGCCTTCC TGAAGGCATT GCGTTTCTTG AAAAACAAAA CAAACCAAAA
TCAGGAATCG GTTGTCTTTC CGATCTCGTC TCCCTTGACC GCAAGCACCG TAAAGCCGTC
AATGCCGCGT TAGGAGAGCT TCTCGGCTAC TATATCTGCC GGACGCTCGA CGATGCAAAA
CAGTCCATTG CAGCTCTCTC GCGGTCAGAC AAGGGAAAAG TACACTTTCT TGTCCTCGAA
CTTGTGCAGG AGAGCGTACC GAAAAATCGC GCCGTCCCTG AAAACGAAGC CCTGAGAGTC
ATTGATCTCC TGCAGTTCCC GCCTGAACTT GACAACGTGC TTGCATTGAT GCTGCATGAA
ACCTACCTCG TCAGGGACCT CAATGCTGCC GAAACGCTCG CCATGCAACA CCCCCAAGCC
TCGTTCGTCA CCCCTGAGGG CGAAAAATTT TCCGGCAAAG GCGTTCTGTT CGGCGGCAGC
TCGACAATCA ATGAAGGGCT TCGACTGGGT AAAAAAGCTG AACGCGACCG ATTGCTCCAG
GAACAGCAGG CACTTGAAAA AACCGTACAG GAAGCAGAAC GGATGCTGAC AGAACTGAAC
AGGGAAATCG AAGGGCAACA AAAAAAACAA CAGCGTTCGG AAACAGAAAA ACACCGTTCG
GAACTTGAAC TCCTTGAAAA AAGTCTGACG CGAATCGATG CCGAAAGAAA CTCGCGCCGT
CAGACGTCAG AGCGCATGGA AGCCGAAATC CGTGAAATTC TTGACGGGCA ACAGCAGCTT
GAACAGGAAG CGGCAGAACT GATTCCCGAA ATACATGAGC ACGAATCGCT CTTCAACACC
GCTTTGGAAA TGGTGCAAAA AGCGCAGGAA AATCTTGCTG CTCTTGAAAC CCGCCATCAC
CAGCTCAGCC TTGAGCTTCA GAAAACGCAG AACATCTACA GAGACTCGCT TCTTGAAGTT
GAAAAGCTTG ATTTCAGAAT TGGAGCCGCA GAACAAAATC GAAAACTCTT ACTGGATGAA
ATAAAAGCCC TTGCATCCGA ATCGGCTCAC CTCACCGATA AAGCTGAAAA ACTGGAGTGC
CACCATGCGA AAATTAAACG GGAATGCGAG GAATTGCTCA TCCGGAGCGC CGGCGAACAG
GAGCAACTGA AAACGCTCGA ACTCGATTAC AGAGAGATGC AATCGGCAAA CCACGACGCT
CACAGCAAGC TCAGAGATCT CCGCCGACAA CATGAAATCA GCCAGCAAAT CCTCGCCTCG
CTGCACGCCG AAGAGAGAGA AACAGCACAA TCGCTCGATC ACCTCATAAC GGCAATCAAG
GTAAAATACA ACACCGATCT TACCCTCTTC GAAACACCAC CGCCTGAAGA GCCCTTTGAT
CAGAATCAGG CAACAGAAAA ACTTGCCTTG CTTGAAAACC AGAGAGAGCA GTTCGGTGCG
GTCAATGAAC TGGCGCTTGA AGAGTACGAA GTTGAAAAAG AGCGACTTGA CTTCCTGCTT
GAACAAAAAG CAGATCTCGA AAGCGCTGCG CTGCAGCTCC GAAACACGAT TGACGAGATC
AACAAAACCG CCCTCCTGAA ATTCCGCCAG ACCTGCACGT CCGTTCGAAA AAACTTTATC
ACGATTTTCC ATGAACTCTT TGATCCGGAA GATGAGGTCG ACCTTATCGT TCACACGATC
GACGACCCTC TTGAAGCCCG TATCGAAATA GTTGCAAAAC CAAAGGGCAA AAAACCGCTC
TCCATCGAAC AGTTAAGCGG TGGAGAAAAA GCTTTGACAG CCCTTTCCCT GCTGTTTGCG
ATCTATCTTG TCAAACCAAG TCCCTTCTGT ATTCTCGATG AAGTTGACGC GCCTCTTGAC
GATGCAAATG TAGGAAGGTT TATTAAACTC CTGAAAAAAT TTGAGAATAA CACCCAATTT
ATTATTGTTA CGCACAACAA GAATTCAATG GCGTCATGCC ATGCACTGTA CGGTGTTACG
ATGGAAGAGG AAGGGGTATC GAAACTTATC CCGGTAAGAC TTCAAAAAAC AGGGCTTTAA
 
Protein sequence
MYLSKIELFG FKSFAHRVTI KFDKGLTAIV GPNGCGKTNV VDAIRWVLGE QKSSLLRSEK 
MENIIFNGSK NLKPLSLTEV SLTIENTRNV LPTEYTEVTV TRRLYRNGDS DYLLNQVPCR
LKDILDLFTD TGMGSDAYSV IELKMIEEII SNKSEERLKL FEEAAGITRY KQRRKQTFRQ
LESASRDLSR VDDVIAEVEK KVRNLKLQVK KAEKLREIKN KLRELDLILS QNQFAACQTK
LEPLRRQLSR EEMLDHERAA AIAQKDSAVQ DAEVMQLNKE QELASSQKKL NDLNNRIHEL
EKQLLQDEEQ RKSLSSGIGR IKTTAGDKQK KSLAFELTAK ALGHEKPALQ KECDKQLAEY
KKLSAEHEEL NSRLQEHRQE LAEKRKKNTE LEKTLNRLSF TRHSLETKIE HRKTTSDRLG
QQKLEIARLL DQSSSDEREI SEKINARSEL VNESRKSDEN IKNQIKILRQ SIETQKEKLL
GFRSERDQLR NQIMLANAVL DNFEGLPEGI AFLEKQNKPK SGIGCLSDLV SLDRKHRKAV
NAALGELLGY YICRTLDDAK QSIAALSRSD KGKVHFLVLE LVQESVPKNR AVPENEALRV
IDLLQFPPEL DNVLALMLHE TYLVRDLNAA ETLAMQHPQA SFVTPEGEKF SGKGVLFGGS
STINEGLRLG KKAERDRLLQ EQQALEKTVQ EAERMLTELN REIEGQQKKQ QRSETEKHRS
ELELLEKSLT RIDAERNSRR QTSERMEAEI REILDGQQQL EQEAAELIPE IHEHESLFNT
ALEMVQKAQE NLAALETRHH QLSLELQKTQ NIYRDSLLEV EKLDFRIGAA EQNRKLLLDE
IKALASESAH LTDKAEKLEC HHAKIKRECE ELLIRSAGEQ EQLKTLELDY REMQSANHDA
HSKLRDLRRQ HEISQQILAS LHAEERETAQ SLDHLITAIK VKYNTDLTLF ETPPPEEPFD
QNQATEKLAL LENQREQFGA VNELALEEYE VEKERLDFLL EQKADLESAA LQLRNTIDEI
NKTALLKFRQ TCTSVRKNFI TIFHELFDPE DEVDLIVHTI DDPLEARIEI VAKPKGKKPL
SIEQLSGGEK ALTALSLLFA IYLVKPSPFC ILDEVDAPLD DANVGRFIKL LKKFENNTQF
IIVTHNKNSM ASCHALYGVT MEEEGVSKLI PVRLQKTGL